RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SPDYCQ5MJ68 293 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 DUPD1Q68J44 220 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 PHLDB2Q86SQ0 1253 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 MYPNQ86TC9 1320 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 WDR75Q8IWA0 830 aaKnown RBP11.37□□□□□ -0.59
CAPN3-203ENST00000349748 DNAJC10Q8IXB1 793 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TRIM22Q8IYM9 498 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 WASF1Q92558 559 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 CASP10Q92851 521 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 TLE6Q9H808 572 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 SELENONQ9NZV5 590 aa11.37□□□□□ -0.59
CAPN3-203ENST00000349748 A0A1W2PQ67 120 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 RIPK2O43353 540 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 PRDM1O75626 825 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 IFNAR1P17181 557 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 DR1Q01658 176 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 HPS3Q969F9 1004 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF594Q96JF6 807 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 TTC1Q99614 292 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 HEPHQ9BQS7 1158 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ERP44Q9BS26 406 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 DRC3Q9H069 523 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 STX8Q9UNK0 236 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 PFASO15067 1338 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 RBAK-RBAKDNI3L0D1 243 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 TRAFD1O14545 582 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 MYCLP1P12525 358 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 NEK2P51955 445 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 FOXO4P98177 505 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 BCL2A1Q16548 175 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 LRRC24Q50LG9 513 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 C1orf228Q6PIY5 440 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 MTDHQ86UE4 582 aaKnown RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 P2RX5Q93086 422 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 MAGEB18Q96M61 343 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ZMAT2Q96NC0 199 aaKnown RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 NAPBQ9H115 298 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 TPK1Q9H3S4 243 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 PSTPIP2Q9H939 334 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 TBCCD1Q9NVR7 557 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ITGB1BP2Q9UKP3 347 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 TRIM17Q9Y577 477 aa11.36□□□□□ -0.59
CAPN3-203ENST00000349748 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.36□□□□□ -0.59
CAPN3-203ENST00000349748 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 BIRC5O15392 142 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 GSC2O15499 205 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ACSL3O95573 720 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PRKCIP41743 596 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 TMED10P49755 219 aaKnown RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 BTKQ06187 659 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ACAP1Q15027 740 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 KRT27Q7Z3Y8 459 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ATP6V0A1Q93050 837 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 TIMMDC1Q9NPL8 285 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 TBK1Q9UHD2 729 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ZFP69BQ9UJL9 534 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PPP1R9AQ9ULJ8 1098 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 KLRC4O43908 158 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ARPC4P59998 168 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 Q6ZNX1 250 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ZNF713Q8N859 430 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 GIPC3Q8TF64 312 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 MCUR1Q96AQ8 359 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 EIF2AQ9BY44 585 aaKnown RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ATAD3AQ9NVI7 634 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PHTF1Q9UMS5 762 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 FAF1Q9UNN5 650 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 RBMX2Q9Y388 322 aaKnown RBP11.35□□□□□ -0.59
CAPN3-203ENST00000349748 FADS3Q9Y5Q0 445 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
CAPN3-203ENST00000349748 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 BTBD19C9JJ37 291 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 CES2O00748 559 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
CAPN3-203ENST00000349748 DCTN3O75935 186 aa11.34□□□□□ -0.59
CAPN3-203ENST00000349748 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms