RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 THSD7BQ9C0I4 1608 aa20.27■□□□□ 0.84
PTN-201ENST00000348225 A0A087WZ62 844 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 LRRIQ3A6PVS8 624 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 KIF2AO00139 706 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 OFD1O75665 1012 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 VTNP04004 478 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 NLRP11P59045 1033 aaKnown RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 PURAQ00577 322 aaKnown RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 CACNB2Q08289 660 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 PSMD6Q15008 389 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 FAM187BQ17R55 369 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 KRT39Q6A163 491 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 EHBP1Q8NDI1 1231 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 NLRP7Q8WX94 980 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 PRIMPOLQ96LW4 560 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 SCLT1Q96NL6 688 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 FDXACB1Q9BRP7 624 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 DESI2Q9BSY9 194 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 HAPLN2Q9GZV7 340 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 NHEJ1Q9H9Q4 299 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 IFT122Q9HBG6 1241 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 ADGRG1Q9Y653 693 aa20.27■□□□□ 0.83
PTN-201ENST00000348225 EPN1Q9Y6I3 576 aaPredicted RBP20.27■□□□□ 0.83
PTN-201ENST00000348225 SMIM35A0A1B0GVV1 85 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 MBLAC1A4D2B0 266 aaPredicted RBP20.26■□□□□ 0.83
PTN-201ENST00000348225 NDUFA10O95299 355 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 IPO7O95373 1038 aaKnown RBP20.26■□□□□ 0.83
PTN-201ENST00000348225 GNAT1P11488 350 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 IRX5P78411 483 aaPredicted RBP20.26■□□□□ 0.83
PTN-201ENST00000348225 APBA1Q02410 837 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 MCL1Q07820 350 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 RAPGEF1Q13905 1077 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 ATF7IP2Q5U623 682 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 MPZL3Q6UWV2 235 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 FMNL3Q8IVF7 1028 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 KIAA0319LQ8IZA0 1049 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 ZNF668Q96K58 619 aaPredicted RBP20.26■□□□□ 0.83
PTN-201ENST00000348225 FNBP1Q96RU3 617 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 APEX2Q9UBZ4 518 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 FHOD1Q9Y613 1164 aa20.26■□□□□ 0.83
PTN-201ENST00000348225 GPR25O00155 361 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
PTN-201ENST00000348225 TUBB4AP04350 444 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 DLATP10515 647 aaKnown RBP20.25■□□□□ 0.83
PTN-201ENST00000348225 HARSP12081 509 aaKnown RBP20.25■□□□□ 0.83
PTN-201ENST00000348225 ACOT2P49753 483 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 GPC3P51654 580 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 NKX3-2P78367 333 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 CAP1Q01518 475 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 ARHGEF6Q15052 776 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 ASIC2Q16515 512 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 SLC9C1Q4G0N8 1177 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 EPC2Q52LR7 807 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 GNASQ5JWF2 1037 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 NYAP1Q6ZVC0 841 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 ERO1AQ96HE7 468 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 CCDC42Q96M95 316 aa20.25■□□□□ 0.83
PTN-201ENST00000348225 MTG1Q9BT17 334 aaPredicted RBP20.25■□□□□ 0.83
PTN-201ENST00000348225 OGTO15294 1046 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 HMGCRP04035 888 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 SERPING1P05155 500 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 CYP2C9P11712 490 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 PRKAR2AP13861 404 aaKnown RBP20.24■□□□□ 0.83
PTN-201ENST00000348225 PROZP22891 400 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 TRIM32Q13049 653 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 CRELD2Q6UXH1 353 aaPredicted RBP20.24■□□□□ 0.83
PTN-201ENST00000348225 SRGAP1Q7Z6B7 1085 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 REXO1L1PQ8IX06 675 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 C7orf31Q8N865 590 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 VTI1AQ96AJ9 217 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 DEF6Q9H4E7 631 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 MINDY3Q9H8M7 445 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 AIPL1Q9NZN9 384 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 CNTNAP2Q9UHC6 1331 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 C17orf102A2RUQ5 167 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 TTLL13PA6NNM8 815 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 TNNT1P13805 278 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 ELNP15502 786 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 CLDN10P78369 228 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 KRT83P78385 493 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 MAP2K1Q02750 393 aaPredicted RBP20.24■□□□□ 0.83
PTN-201ENST00000348225 ZNF568Q3ZCX4 644 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 IQCEQ6IPM2 695 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 ZBTB33Q86T24 672 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 RAET1EQ8TD07 263 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 PPP1R16BQ96T49 567 aa20.24■□□□□ 0.83
PTN-201ENST00000348225 SSU72P8A0A1W2PR75 194 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 MYADML2A6NDP7 307 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 EIF3CLB5ME19 914 aaKnown RBP20.23■□□□□ 0.83
PTN-201ENST00000348225 ABLIM1O14639 778 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 JAM2P57087 298 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 TDRD12Q587J7 1177 aaKnown RBP20.23■□□□□ 0.83
PTN-201ENST00000348225 BRSK2Q8IWQ3 736 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 ACRBPQ8NEB7 543 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 LMO3Q8TAP4 145 aa20.23■□□□□ 0.83
PTN-201ENST00000348225 EIF3CQ99613 913 aaKnown RBP20.23■□□□□ 0.83
PTN-201ENST00000348225 STK33Q9BYT3 514 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms