RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ARHGAP20Q9P2F6 1191 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 SSU72P8A0A1W2PR75 194 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 KPNA6O60684 536 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 IPO7O95373 1038 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 NLRP11P59045 1033 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 KRT83P78385 493 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 BEX3Q00994 111 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 PRPF4BQ13523 1007 aaKnown RBP23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 ASIC2Q16515 512 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 FAM187BQ17R55 369 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 KRT39Q6A163 491 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 IQCEQ6IPM2 695 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 NFRKBQ6P4R8 1299 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 LMO3Q8TAP4 145 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 LMBR1Q8WVP7 490 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 IFT122Q9HBG6 1241 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 APEX2Q9UBZ4 518 aa23.3■■□□□ 1.32
TSPAN3-202ENST00000346495 A0A087WZ62 844 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 ZEB2O60315 1214 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 VTNP04004 478 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 ACOT2P49753 483 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 IRX5P78411 483 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 CRELD2Q6UXH1 353 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 TSHZ1Q6ZSZ6 1077 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 ZNF668Q96K58 619 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 FDXACB1Q9BRP7 624 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 TCHPQ9BT92 498 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 DEF6Q9H4E7 631 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 RNF186Q9NXI6 227 aa23.29■■□□□ 1.32
TSPAN3-202ENST00000346495 TTLL13PA6NNM8 815 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 HOXD10P28358 340 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 JAM2P57087 298 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 GJA9P57773 515 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 CHMP4BP1P59074 171 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 CDC42EP1Q00587 391 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 MCL1Q07820 350 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 ATF7IP2Q5U623 682 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 ZNF410Q86VK4 478 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 KIAA0319LQ8IZA0 1049 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 FNBP1Q96RU3 617 aa23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 RBAKQ9NYW8 714 aaPredicted RBP23.28■■□□□ 1.32
TSPAN3-202ENST00000346495 TULP1O00294 542 aaPredicted RBP23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 TRPA1O75762 1119 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 PLEKP08567 350 aaPredicted RBP23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 DLATP10515 647 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 PROZP22891 400 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 YY1P25490 414 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 EIF4A3P38919 411 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 CLDN10P78369 228 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 TMEM132AQ24JP5 1023 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 HGSNATQ68CP4 663 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 GJB7Q6PEY0 223 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 MPZL3Q6UWV2 235 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 FMNL3Q8IVF7 1028 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 VTI1AQ96AJ9 217 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 POP1Q99575 1024 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 STK33Q9BYT3 514 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 MINDY3Q9H8M7 445 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 SPC25Q9HBM1 224 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 DNAJC12Q9UKB3 198 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 TNFSF13BQ9Y275 285 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 COQ4Q9Y3A0 265 aa23.27■■□□□ 1.32
TSPAN3-202ENST00000346495 SMIM35A0A1B0GVV1 85 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 MBLAC1A4D2B0 266 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 ABLIM1O14639 778 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 OGTO15294 1046 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 SEPT4O43236 478 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 HARSP12081 509 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 GPC3P51654 580 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 MAP2K1Q02750 393 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 TDRD12Q587J7 1177 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 ZBTB33Q86T24 672 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 NLRP7Q8WX94 980 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 PRIMPOLQ96LW4 560 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 UPF3AQ9H1J1 476 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 AJAP1Q9UKB5 411 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 REXO2Q9Y3B8 237 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 BZW2Q9Y6E2 419 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 AKR1B10O60218 316 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 C6orf222P0C671 652 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 STAT1P42224 750 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 KIF11P52732 1056 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 PURAQ00577 322 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 CAP1Q01518 475 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 KLHL30Q0D2K2 578 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 SPA17Q15506 151 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 SRGAP1Q7Z6B7 1085 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 SCLT1Q96NL6 688 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 PTPRHQ9HD43 1115 aa23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 TOPORSQ9NS56 1045 aaPredicted RBP23.26■■□□□ 1.31
TSPAN3-202ENST00000346495 LCA5LO95447 670 aa23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 RARBP10826 455 aa23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 FERP16591 822 aa23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 ETF1P62495 437 aaKnown RBP23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 NKX3-2P78367 333 aa23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 CACNB2Q08289 660 aaPredicted RBP23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 ZNF568Q3ZCX4 644 aa23.25■■□□□ 1.31
TSPAN3-202ENST00000346495 ZBTB41Q5SVQ8 909 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms