RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 LRRC59Q96AG4 307 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 VPS11Q9H270 941 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 FAM47CQ5HY64 1035 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ZNF473Q8WTR7 871 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 PDLIM2Q96JY6 352 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 SNX24Q9Y343 169 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 PASD1Q8IV76 773 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 DDIASQ8IXT1 998 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 MRPL48Q96GC5 212 aaKnown RBP20.44■□□□□ 0.86
HDAC4-201ENST00000345617 MSTO1Q9BUK6 570 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 ZWILCHQ9H900 591 aa20.44■□□□□ 0.86
HDAC4-201ENST00000345617 PDIA2Q13087 525 aaKnown RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 EAF2Q96CJ1 260 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 ZFYVE19Q96K21 471 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 NDUFA5Q16718 116 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 KBTBD12Q3ZCT8 623 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 KRT35Q92764 455 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 KRCC1Q9NPI7 259 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 TUBGCP4Q9UGJ1 667 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 SAMD9LQ8IVG5 1584 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 LRRIQ1Q96JM4 1722 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 CCT8L1PA6NM43 557 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 FBXL5Q9UKA1 691 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 PCCAP05165 728 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 FAM167AQ96KS9 214 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 FRMD8Q9BZ67 464 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 ZNF699Q32M78 642 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 XXYLT1Q8NBI6 393 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 FASTKD1Q53R41 847 aaKnown RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 SEC16BQ96JE7 1060 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 DHX36Q9H2U1 1008 aaKnown RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 NUP62P37198 522 aaPredicted RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 ZNF667Q5HYK9 610 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 ATL2Q8NHH9 583 aa20.43■□□□□ 0.86
HDAC4-201ENST00000345617 MMTAG2Q9BU76 263 aaKnown RBP20.43■□□□□ 0.86
HDAC4-201ENST00000345617 KANSL1LA0AUZ9 987 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 KDSRQ06136 332 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 XDHP47989 1333 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 AP3M2P53677 418 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 NSUN2Q08J23 767 aaKnown RBP eCLIP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 TBC1D19Q8N5T2 526 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 MTA3Q9BTC8 594 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 LONP2Q86WA8 852 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 ADAM30Q9UKF2 790 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 C5orf58C9J3I9 102 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 FBXW4P57775 412 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 CEP152O94986 1710 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 TRIP4Q15650 581 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 ITIH6Q6UXX5 1313 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 SH3GL1Q99961 368 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 PDE8BO95263 885 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 RECQLP46063 649 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 GFPT1Q06210 699 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-201ENST00000345617 SFMBT1Q9UHJ3 866 aa20.42■□□□□ 0.86
HDAC4-201ENST00000345617 K7ERI5 159 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 LBRQ14739 615 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ANKS3Q6ZW76 656 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 KRT27Q7Z3Y8 459 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 STAG2Q8N3U4 1231 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 TEKT4Q8WW24 435 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 APOL1O14791 398 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ALDH18A1P54886 795 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 IKBIPQ70UQ0 350 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 CATSPER2Q96P56 530 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 SIKE1Q9BRV8 207 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 G3BP2Q9UN86 482 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 NFIBO00712 420 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 DLGAP3O95886 979 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 TTC33Q6PID6 262 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 HNRNPLLQ8WVV9 542 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 NPHS2Q9NP85 383 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 M0R2C6 588 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ENO1P06733 434 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 KCTD2Q14681 263 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 RNF219Q5W0B1 726 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 PPM1NQ8N819 430 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 GYS2P54840 703 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 PSMD3O43242 534 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 SDC4P31431 198 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 FAM83BQ5T0W9 1011 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 MFN1Q8IWA4 741 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ATP10BO94823 1461 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 H0YC42 278 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ZFRQ96KR1 1074 aaKnown RBP20.41■□□□□ 0.86
HDAC4-201ENST00000345617 FAM192AQ9GZU8 254 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 SYTL2Q9HCH5 934 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 ADGRG1Q9Y653 693 aa20.41■□□□□ 0.86
HDAC4-201ENST00000345617 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
HDAC4-201ENST00000345617 SRGAP2O75044 1071 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms