RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 AIM2O14862 343 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ZBED4O75132 1171 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 HERVK_113P62684 666 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 DDB1Q16531 1140 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 CDO1Q16878 200 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 YTHDF3Q7Z739 585 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 CMTM5Q96DZ9 223 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 NEU2Q9Y3R4 380 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 DMPKQ09013 629 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 RHOBTB3O94955 611 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 SERPINB2P05120 415 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 SNX30Q5VWJ9 437 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 PLD3Q8IV08 490 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 KCNB2Q92953 911 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 FAM149B1Q96BN6 582 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 LACRTQ9GZZ8 138 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TAF6LQ9Y6J9 622 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 MLH1P40692 756 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ROR2Q01974 943 aaKnown RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TAF12Q16514 161 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 C16orf89Q6UX73 402 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 GPR141Q7Z602 305 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TMCO5AQ8N6Q1 288 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 PRCCQ92733 491 aaPredicted RBP12.8□□□□□ -0.36
COL12A1-202ENST00000345356 HEY1Q9Y5J3 304 aa12.8□□□□□ -0.36
COL12A1-202ENST00000345356 TYK2P29597 1187 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 MAGEA4P43358 317 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 KCNJ1P48048 391 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 HSPA13P48723 471 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 FOXD4Q12950 439 aaPredicted RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 MAPRE2Q15555 327 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 AENQ8WTP8 325 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 NDEL1Q9GZM8 345 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 M0R3G1 203 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 SERPINB8P50452 374 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ITGA8P53708 1063 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 GRIN1Q05586 938 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 TFDP2Q14188 446 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 INPP5AQ14642 412 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 SMAD1Q15797 465 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 IRGCQ6NXR0 463 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ZNF483Q8TF39 744 aaPredicted RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 PRPF18Q99633 342 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 SUCLA2Q9P2R7 463 aaPredicted RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 KRT34O76011 436 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 TCN1P20061 433 aaPredicted RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ICA1Q05084 483 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ADRM1Q16186 407 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 WASHC2DQ5SRD0 308 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 USPL1Q5W0Q7 1092 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 LEMD3Q9Y2U8 911 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 NEMP1O14524 444 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 KCNA6P17658 529 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ANXA13P27216 316 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 PTPN4P29074 926 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 SCUBE1Q8IWY4 988 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 AGAP11Q8TF27 550 aa12.79□□□□□ -0.36
COL12A1-202ENST00000345356 METTL5Q9NRN9 209 aaKnown RBP12.79□□□□□ -0.36
COL12A1-202ENST00000345356 ALAS1P13196 640 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 STK4Q13043 487 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 POTECB2RU33 542 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 UCHL3P15374 230 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 RPS6P62753 249 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 ALCAMQ13740 583 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 TTC33Q6PID6 262 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms