RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 RPS6KC1Q96S38 1066 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 SNX25Q9H3E2 840 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 MRPL11Q9Y3B7 192 aaKnown RBP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 ORC6Q9Y5N6 252 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 CALUO43852 315 aaPredicted RBP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 SGSM1Q2NKQ1 1148 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 AKIRIN2Q53H80 203 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 TUBA3EQ6PEY2 450 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 KRT74Q7RTS7 529 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 RIBC1Q8N443 379 aaPredicted RBP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 CAPSLQ8WWF8 208 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 CCT7Q99832 543 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 NT5C3AQ9H0P0 336 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 SMYD3Q9H7B4 428 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 CHMP1AQ9HD42 196 aaPredicted RBP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 EXOC7Q9UPT5 735 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
LIN28B-201ENST00000345080 PCDHA5Q9Y5H7 936 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 PPP2R3BQ9Y5P8 575 aa8.17□□□□□ -1.1
LIN28B-201ENST00000345080 KAT6BQ8WYB5 2073 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TRIM64CA6NLI5 447 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 CPA3P15088 417 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 CHN1P15882 459 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TNFAIP3P21580 790 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 NFKBIAP25963 317 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 XIAPP98170 497 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 FCHO2Q0JRZ9 810 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 PTGDRQ13258 359 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 AAK1Q2M2I8 961 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 PDCD4Q53EL6 469 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 RRAGAQ7L523 313 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DTX3LQ8TDB6 740 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 XAGE2Q96GT9 111 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 NARS2Q96I59 477 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 NCOA5Q9HCD5 579 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ABCF3Q9NUQ8 709 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DNAJC17Q9NVM6 304 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 CYP39A1Q9NYL5 469 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SMG5Q9UPR3 1016 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 KDM3AQ9Y4C1 1321 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TMEM88BA6NKF7 163 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 FBLN1P23142 703 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DR1Q01658 176 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ATP1A4Q13733 1029 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ZC3H12BQ5HYM0 836 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 RC3H1Q5TC82 1133 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 METTL23Q86XA0 190 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 STX12Q86Y82 276 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 VPS39Q96JC1 886 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 CHAMP1Q96JM3 812 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 PGBD1Q96JS3 809 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 BRIP1Q9BX63 1249 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 VPS33BQ9H267 617 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DHX36Q9H2U1 1008 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TRPC7Q9HCX4 862 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ZNRF3Q9ULT6 936 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SNX5Q9Y5X3 404 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 UBE4BO95155 1302 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ALOX5P09917 674 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 GRAPQ13588 217 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TCP11X2Q5H9J9 407 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TMTC4Q5T4D3 741 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 PAPD7Q5XG87 772 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 RNF180Q86T96 592 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 TCAIMQ8N3R3 496 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 GRAPLQ8TC17 118 aaPredicted RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 LPIN2Q92539 896 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 NMD3Q96D46 503 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ARHGAP26Q9UNA1 814 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 KLHL20Q9Y2M5 609 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SRPRBQ9Y5M8 271 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 VWDEQ8N2E2 1590 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 LZTS3O60299 673 aaPredicted RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SERPING1P05155 500 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ATP5BP06576 529 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ANXA13P27216 316 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 LIFRP42702 1097 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 BCAMP50895 628 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DEFA1P59665 94 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DEFA3P59666 94 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 MFSD14BQ5SR56 506 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 GPATCH4Q5T3I0 446 aaKnown RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 ZNF658Q5TYW1 1059 aaPredicted RBP8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DENND6AQ8IWF6 608 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 JADE3Q92613 823 aa8.16□□□□□ -1.1
LIN28B-201ENST00000345080 EDEM3Q9BZQ6 932 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms