RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OTUD6AQ7L8S5 288 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 CCDC60Q8IWA6 550 aaPredicted RBP16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 TATDN2Q93075 761 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 BCCIPQ9P287 314 aaKnown RBP eCLIP16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 GOLGA6L10A6NI86 522 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 MYO1CO00159 1063 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 EIF3HO15372 352 aaKnown RBP eCLIP16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 KCNA2P16389 499 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 PTPRAP18433 802 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 FMO1Q01740 532 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 GUCY1A3Q02108 690 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 PRKCEQ02156 737 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 TMEM132BQ14DG7 1078 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 MTERF2Q49AM1 385 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 LRRC45Q96CN5 670 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 TMEM8AQ9HCN3 771 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 JPH1Q9HDC5 661 aaPredicted RBP16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 CYP11B1P15538 503 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 NR1D1P20393 614 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 PTENP60484 403 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 CYFIP1Q7L576 1253 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 SHC3Q92529 594 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 ATP6V1G3Q96LB4 118 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
VIPAS39-202ENST00000343765 MAPK13O15264 365 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 PDE6CP51160 858 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 DHX9Q08211 1270 aaKnown RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 ANGEL2Q5VTE6 544 aaKnown RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 DCAF15Q66K64 600 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 SV2AQ7L0J3 742 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 PHLDB2Q86SQ0 1253 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 RAB20Q9NX57 234 aa16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 ZNF214Q9UL59 606 aaPredicted RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 TTC7AQ9ULT0 858 aaPredicted RBP16.02■□□□□ 0.16
VIPAS39-202ENST00000343765 TULP2O00295 520 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 SPOPO43791 374 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 CLSTN1O94985 981 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 PSAPP07602 524 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 CYP24A1Q07973 514 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 CD302Q8IX05 232 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 SLC17A8Q8NDX2 589 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 REPS2Q8NFH8 660 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 TMEM174Q8WUU8 243 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 NAP1L3Q99457 506 aaPredicted RBP16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 XPNPEP1Q9NQW7 623 aa16.02■□□□□ 0.15
VIPAS39-202ENST00000343765 MYZAPP0CAP1 466 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 RPS12P25398 132 aaKnown RBP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 ACTR2P61160 394 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 SNRPFP62306 86 aaKnown RBP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 SAMD3Q8N6K7 520 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 AS3MTQ9HBK9 375 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 A1CFQ9NQ94 594 aaKnown RBP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 SLC9A2Q9UBY0 812 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 ATP8A1Q9Y2Q0 1164 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 BHMG1C9JSJ3 638 aaPredicted RBP16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 SKOR1P84550 965 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 ZNF844Q08AG5 666 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 TMC3Q7Z5M5 1100 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 SNX24Q9Y343 169 aa16.01■□□□□ 0.15
VIPAS39-202ENST00000343765 TCRBV7S2A1N4TA0A589 114 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 STBD1O95210 358 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 DSG3P32926 999 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 TGFB2P61812 414 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
VIPAS39-202ENST00000343765 EIF1ADQ8N9N8 165 aaKnown RBP16■□□□□ 0.15
VIPAS39-202ENST00000343765 TMEM143Q96AN5 459 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 FMO2Q99518 471 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 RAB17Q9H0T7 212 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 TMBIM4Q9HC24 238 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 CYP26B1Q9NR63 512 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 FAM114A2Q9NRY5 505 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 GINM1Q9NU53 330 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 H0YGN5 161 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 PYGMP11217 842 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 GPC3P51654 580 aa16■□□□□ 0.15
VIPAS39-202ENST00000343765 KDM7AQ6ZMT4 941 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms