RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 TFDP2Q14188 446 aa12.87□□□□□ -0.35
SEMA6A-202ENST00000343348 MTBPQ96DY7 904 aa12.87□□□□□ -0.35
SEMA6A-202ENST00000343348 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
SEMA6A-202ENST00000343348 CHRNA3P32297 505 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 CDH6P55285 790 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SPON2Q9BUD6 331 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SERPIND1P05546 499 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 RECQLP46063 649 aaPredicted RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 ALCAMQ13740 583 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 TWF2Q6IBS0 349 aaKnown RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 PATL1Q86TB9 770 aaKnown RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 CLEC4FQ8N1N0 589 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 ABCD1P33897 745 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 FAM196AQ6ZSG2 479 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 PBXIP1Q96AQ6 731 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 CHP1Q99653 195 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 GCOM2Q9BZD3 368 aaPredicted RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 KCNA3P22001 575 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 MAPK6Q16659 721 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 C4orf33Q8N1A6 199 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 ATP11CQ8NB49 1132 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 TMEM161AQ9NX61 479 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 MAD2L2Q9UI95 211 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 XPO1O14980 1071 aaKnown RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 HUS1O60921 280 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 CDC27P30260 824 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 RMDN3Q96TC7 470 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 EPN3Q9H201 632 aa12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 LIMA1Q9UHB6 759 aaKnown RBP12.86□□□□□ -0.35
SEMA6A-202ENST00000343348 H0Y626 953 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 CCDC22O60826 627 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 TRIM16O95361 564 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 SDC4P31431 198 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 BCAR1P56945 870 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 PSMC5P62195 406 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 EMSYQ7Z589 1322 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 GRID2IPA4D2P6 1211 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 F8W8V4 182 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 MDH1P40925 334 aaKnown RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 DPF2Q92785 391 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 GYS1P13807 737 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 SWSAP1Q6NVH7 229 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 LRRC31Q6UY01 552 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 PID1Q7Z2X4 250 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 ZNF555Q8NEP9 628 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 ASIC4Q96FT7 647 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 CYP26A1O43174 497 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 KRT72Q14CN4 511 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 COG1Q8WTW3 980 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 STXBP3O00186 592 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 AIM2O14862 343 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 GFAPP14136 432 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 LIFRP42702 1097 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 CPA5Q8WXQ8 436 aa12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 RNPC3Q96LT9 517 aaKnown RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
SEMA6A-202ENST00000343348 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 AARS2Q5JTZ9 985 aaKnown RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 ZNF513Q8N8E2 541 aaPredicted RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 SNRNP27Q8WVK2 155 aaKnown RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 GIMAP4Q9NUV9 329 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 P3H1Q32P28 736 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 PROM2Q8N271 834 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 TMCO5AQ8N6Q1 288 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 ACAP3Q96P50 834 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 TSSK1BQ9BXA7 367 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 EML4Q9HC35 981 aaKnown RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 BIVM-ERCC5R4GMW8 1640 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 RHOT1Q8IXI2 618 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 CNBD2Q96M20 576 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
SEMA6A-202ENST00000343348 ADGRA2Q96PE1 1338 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms