RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CXorf38Q8TB03 319 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 FAM133BQ5BKY9 247 aaKnown RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 NUDT12Q9BQG2 462 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM45Q9H8W5 580 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-202ENST00000342494 NYAP2Q9P242 653 aa15.92■□□□□ 0.14
UBE3B-202ENST00000342494 ATICP31939 592 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SH3BGRP55822 239 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 CAV1Q03135 178 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SNCBQ16143 134 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 ACBD5Q5T8D3 534 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SGMS1Q86VZ5 419 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 HNRNPCL2B2RXH8 293 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF197O14709 1029 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 HNRNPCL1O60812 293 aaKnown RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SPARCL1Q14515 664 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 GLB1LQ6UWU2 654 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 DCUN1D1Q96GG9 259 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 MYOZ2Q9NPC6 264 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SYNDIG1LA6NDD5 238 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 DPEP1P16444 411 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 TAP1Q03518 808 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 HSP90AA5PQ58FG0 334 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 ACAD11Q709F0 780 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 PPM1NQ8N819 430 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 ZC3H15Q8WU90 426 aaKnown RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 VCPKMTQ9H867 229 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 PARVAQ9NVD7 372 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 NR1D1P20393 614 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 NMT1P30419 496 aaKnown RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 TMEM62Q0P6H9 643 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 RASIP1Q5U651 963 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 L3MBTL1Q9Y468 752 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 DNAJC8O75937 253 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-202ENST00000342494 KRT80Q6KB66 452 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 PID1Q7Z2X4 250 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 ANKRD13AQ8IZ07 590 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 LINC00116Q8NCU8 138 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 RAPGEF5Q92565 580 aa15.91■□□□□ 0.14
UBE3B-202ENST00000342494 RPS12P25398 132 aaKnown RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 TPI1P60174 286 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 ESRRGP62508 458 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF211Q13398 564 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 TMEM132DQ14C87 1099 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 TAF11Q15544 211 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SRBD1Q8N5C6 995 aaKnown RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 CENPKQ9BS16 269 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 COG4Q9H9E3 785 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 PFASO15067 1338 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 RASA4BC9J798 803 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 RASA4O43374 803 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 MYO1DO94832 1006 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 ITGA4P13612 1032 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 RASSF3Q86WH2 238 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF512Q96ME7 567 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SH2D3AQ9BRG2 576 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 PARD6BQ9BYG5 372 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 CCDC151A5D8V7 595 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 TRPA1O75762 1119 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SULT1E1P49888 294 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 NUGGCQ68CJ6 796 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 MRPS25P82663 173 aaKnown RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 ANO4Q32M45 955 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SEPT5Q99719 369 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 DEFB129Q9H1M3 183 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 APOBEC2Q9Y235 224 aaKnown RBP15.9■□□□□ 0.14
UBE3B-202ENST00000342494 SLC4A7Q9Y6M7 1214 aa15.9■□□□□ 0.14
UBE3B-202ENST00000342494 A0A0G2JND7 137 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.14
UBE3B-202ENST00000342494 GPS1Q13098 491 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 SNX17Q15036 470 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 EMBQ6PCB8 327 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 XAB2Q9HCS7 855 aaKnown RBP15.89■□□□□ 0.14
UBE3B-202ENST00000342494 EHD2Q9NZN4 543 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 THEGQ9P2T0 379 aa15.89■□□□□ 0.14
UBE3B-202ENST00000342494 FAF1Q9UNN5 650 aaPredicted RBP15.89■□□□□ 0.14
UBE3B-202ENST00000342494 FAM95CA0A1B0GW59 222 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ASAP2O43150 1006 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ATP2C1P98194 919 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PCDHB8Q9UN66 801 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 LUC7L3O95232 432 aaKnown RBP15.89■□□□□ 0.13
UBE3B-202ENST00000342494 HMBSP08397 361 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 CYP2C9P11712 490 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 GTF2H3Q13889 308 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PDIA5Q14554 519 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 TRIM59Q8IWR1 403 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 ASAP3Q8TDY4 903 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 TEKT4Q8WW24 435 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 TRIM55Q9BYV6 548 aa15.89■□□□□ 0.13
UBE3B-202ENST00000342494 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
UBE3B-202ENST00000342494 APOL1O14791 398 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms