RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 EXTL3O43909 919 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 CENPUQ71F23 418 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 PPFIBP2Q8ND30 876 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 PDCD2LQ9BRP1 358 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 CCDC151A5D8V7 595 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 SUPT20HL2P0C7V6 817 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 SEPT6Q14141 434 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 RNF25Q96BH1 459 aaPredicted RBP20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 GLIS2Q9BZE0 524 aaPredicted RBP20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 MED24O75448 989 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 VEPH1Q14D04 833 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 ENGASEQ8NFI3 743 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 ADM5C9JUS6 153 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 UCHL3P15374 230 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 ATP11AP98196 1134 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 SLC7A5Q01650 507 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 GLE1Q53GS7 698 aaKnown RBP20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 DNERQ8NFT8 737 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 LRRC8CQ8TDW0 803 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 ANKS1AQ92625 1134 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 CAPS2Q9BXY5 557 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 FMN2Q9NZ56 1722 aa20.86■□□□□ 0.93
SEMA6C-201ENST00000341697 C17orf102A2RUQ5 167 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 WTIPA6NIX2 430 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 RTN2O75298 545 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 ARHGAP25P42331 645 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 RHOT1Q8IXI2 618 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 FAF2Q96CS3 445 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 TARS2Q9BW92 718 aaKnown RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 HEY1Q9Y5J3 304 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 S100BP04271 92 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 EFHC2Q5JST6 749 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 ZNF484Q5JVG2 852 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 NOTUMQ6P988 496 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 BNIP3LO60238 219 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 TOB1P50616 345 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 KCTD16Q68DU8 428 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 KSR1Q8IVT5 923 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 FBXO16Q8IX29 292 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 RUSC1Q9BVN2 902 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 KLHL8Q9P2G9 620 aaPredicted RBP20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 ITIH6Q6UXX5 1313 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 NFKBIAP25963 317 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 ZFPM1Q8IX07 1006 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 WNT8AQ9H1J5 351 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 SMYD2Q9NRG4 433 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 CPA4Q9UI42 421 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 TBX20Q9UMR3 447 aa20.85■□□□□ 0.93
SEMA6C-201ENST00000341697 VWA5AO00534 786 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 CREB3O43889 395 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 TADA2AO75478 443 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 TPD52P55327 224 aaPredicted RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 BTBD8Q5XKL5 378 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 PYROXD1Q8WU10 500 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 TMEM8AQ9HCN3 771 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 DDX56Q9NY93 547 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 GLB1LQ6UWU2 654 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 PDHXO00330 501 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 IL9RQ01113 521 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 ARHGEF2Q92974 986 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 MKRN1Q9UHC7 482 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 DPYSL4O14531 572 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 OAZ1P54368 228 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 NXNQ6DKJ4 435 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 NDUFAF2Q8N183 169 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 P4HA2O15460 535 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 SRGAP2O75044 1071 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 SEC31AO94979 1220 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 ZNF449Q6P9G9 518 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 SPATA2LQ8IUW3 424 aaPredicted RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 TRIM56Q9BRZ2 755 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 INTS9Q9NV88 658 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 TLK1Q9UKI8 766 aa20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 FNDC3AQ9Y2H6 1198 aaKnown RBP20.84■□□□□ 0.93
SEMA6C-201ENST00000341697 NME3Q13232 169 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 NR1I3Q14994 352 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 CACNA2D3Q8IZS8 1091 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 SLIT3O75094 1523 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 RIC1Q4ADV7 1423 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 APOEP02649 317 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 TMED2Q15363 201 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 RNF219Q5W0B1 726 aaPredicted RBP20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 C18orf8Q96DM3 657 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 HPCAL4Q9UM19 191 aa20.83■□□□□ 0.93
SEMA6C-201ENST00000341697 MANSC4A6NHS7 340 aaPredicted RBP20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 HLA-DRAP01903 254 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 FAM198AQ9UFP1 575 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 LCP1P13796 627 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 RASSF2P50749 326 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 RHBDL3P58872 404 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 PPATQ06203 517 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 CFAP36Q96G28 342 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 PIDD1Q9HB75 910 aa20.83■□□□□ 0.92
SEMA6C-201ENST00000341697 EXOC1LA0A1B0GW35 172 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 ALDH1A1P00352 501 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 MT-ND3P03897 115 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 CLTAP09496 248 aa20.82■□□□□ 0.92
SEMA6C-201ENST00000341697 RALAP11233 206 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms