RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 FAM213AQ9BRX8 229 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 MRFAP1Q9Y605 127 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TADA2AO75478 443 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 TTC4O95801 387 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 SRRM1Q8IYB3 904 aaKnown RBP13.68□□□□□ -0.22
DNMT1-201ENST00000340748 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 HSPH1Q92598 858 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 C7orf25Q9BPX7 421 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 DPYDQ12882 1025 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 OR6B3Q8NGW1 331 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-201ENST00000340748 RNF139Q8WU17 664 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 PRPF31Q8WWY3 499 aaKnown RBP13.68□□□□□ -0.22
DNMT1-201ENST00000340748 KLHL29Q96CT2 875 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 WNT8AQ9H1J5 351 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 CHRNA3P32297 505 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.228e-8■■■■■ 53
DNMT1-201ENST00000340748 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 RCN2Q14257 317 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 SDCCAG3Q96C92 435 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 NUP85Q9BW27 656 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 PCDHA10Q9Y5I2 948 aa13.68□□□□□ -0.22
DNMT1-201ENST00000340748 KRT10P13645 584 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 VCAM1P19320 739 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SEPT8Q92599 483 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 FAF2Q96CS3 445 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 EPS15L1Q9UBC2 864 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 TARSL2A2RTX5 802 aaKnown RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 TBX3O15119 743 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SOX5P35711 763 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SESN3P58005 492 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 GPD1LQ8N335 351 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 POLR3FQ9H1D9 316 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 DONSONQ9NYP3 566 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 KIAA0391O15091 583 aaKnown RBP13.67□□□□□ -0.22
DNMT1-201ENST00000340748 OPHN1O60890 802 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SATB1Q01826 763 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ANKRD40Q6AI12 368 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 TRAPPC3O43617 180 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 KRT37O76014 449 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 BAG5Q9UL15 447 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 ANGPTL3Q9Y5C1 460 aa13.67□□□□□ -0.22
DNMT1-201ENST00000340748 USP27XA6NNY8 438 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 UBE4BO95155 1302 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ACSL3O95573 720 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 GDAP1Q8TB36 358 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 MRPL4Q9BYD3 311 aaKnown RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 MSCO60682 206 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 TOM1L1O75674 476 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 AKR1A1P14550 325 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 CA4P22748 312 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 IQCB1Q15051 598 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 KYAT1Q16773 422 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ANKRD20A8PQ5CZ79 823 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ANKRD20A2Q5SQ80 823 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ANKRD20A1Q5TYW2 823 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 DDTLA6NHG4 134 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-201ENST00000340748 MAPK13O15264 365 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 STRNO43815 780 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF18P17022 549 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 SMARCA1P28370 1054 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 CIITAP33076 1130 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 SPATC1LQ9H0A9 340 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 COG7P83436 770 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 KLHL38Q2WGJ6 581 aa13.66□□□□□ -0.22
DNMT1-201ENST00000340748 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms