RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CES2O00748 559 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 BIRC5O15392 142 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 DPEP1P16444 411 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 STX2P32856 288 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 ITGA1P56199 1179 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SNAP25P60880 206 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 RPS6KA1Q15418 735 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 SNCBQ16143 134 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 TIMM50Q3ZCQ8 353 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 NEK5Q6P3R8 708 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 GALNT18Q6P9A2 607 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CABP7Q86V35 215 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 CCNJLQ8IV13 435 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 EFCAB3Q8N7B9 438 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 KRT82Q9NSB4 513 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 AATFQ9NY61 560 aaKnown RBP eCLIP3.49□□□□□ -1.85
CSMD3-202ENST00000339701 BCL9O00512 1426 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
CSMD3-202ENST00000339701 PEX14O75381 377 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 BRD1O95696 1058 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 HADHAP40939 763 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RAB25P57735 213 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PRAMEF18Q5VWM3 479 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 C4orf50Q6ZRC1 276 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MMS22LQ6ZRQ5 1243 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PTF1AQ7RTS3 328 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CATSPER3Q86XQ3 398 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CFAP61Q8NHU2 1237 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM172AQ8WUF8 416 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 WDR60Q8WVS4 1066 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PANX2Q96RD6 677 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MYOZ2Q9NPC6 264 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 NMRK1Q9NWW6 199 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ATP6V1HQ9UI12 483 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF229Q9UJW7 825 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SMG5Q9UPR3 1016 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SBF2Q86WG5 1849 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 LY75O60449 1722 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 EMSYQ7Z589 1322 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MYO18AQ92614 2054 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CDK5RAP2Q96SN8 1893 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PRDM1O75626 825 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MLYCDO95822 493 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM107AO95990 144 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KRT19P08727 400 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CHRNA5P30532 468 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 AP2B1P63010 937 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ATP8B2P98198 1209 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PRPSAP1Q14558 356 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STXBP2Q15833 593 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ARL6IP4Q66PJ3 421 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PSRC1Q6PGN9 363 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FOXP4Q8IVH2 680 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 LRGUKQ96M69 825 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MMADHCQ9H3L0 296 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TBC1D23Q9NUY8 699 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STARD13Q9Y3M8 1113 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 NAV1Q8NEY1 1877 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 RALGAPA1Q6GYQ0 2036 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 KPNA7A9QM74 516 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 IRF6O14896 467 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TNNC2P02585 160 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 URODP06132 367 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GAP43P17677 238 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TGFBR2P37173 567 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CCT5P48643 541 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 LIG3P49916 1009 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CTSWP56202 376 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TBC1D9BQ66K14 1250 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 APOA5Q6Q788 366 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GLB1LQ6UWU2 654 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 EIF1ADQ8N9N8 165 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ZNF496Q96IT1 587 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MMTAG2Q9BU76 263 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 FAM117AQ9C073 453 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 TOPORSQ9NS56 1045 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ABI2Q9NYB9 513 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 GGT7Q9UJ14 662 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STK38LQ9Y2H1 464 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PTPRZ1P23471 2315 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 IQANK1A0A1B0GTG1 560 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 HGSO14964 777 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MAPK13O15264 365 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PEX1O43933 1283 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 EGFRP00533 1210 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 HDDC2Q7Z4H3 204 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC197Q8NCU1 140 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 AGBL3Q8NEM8 1001 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SGSM3Q96HU1 749 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 DDX56Q9NY93 547 aaKnown RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SCHIP1Q9P0W5 487 aaPredicted RBP3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ABCC4O15439 1325 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 NEDD4P46934 1319 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SPATA31A5Q5VU36 1347 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 SPATA31A7Q8IWB4 1347 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ARHGEF35A5YM69 484 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 ERVV-1B6SEH8 477 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 STX11O75558 287 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 MAPK1P28482 360 aa3.48□□□□□ -1.85
CSMD3-202ENST00000339701 PLCB3Q01970 1234 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms