RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TMEM237Q96Q45 408 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 SYNGAP1Q96PV0 1343 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 CHRNA3P32297 505 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 VAMP7P51809 220 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 MPP2Q14168 576 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 GSTA5Q7RTV2 222 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 ZC3H3Q8IXZ2 948 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 CPA5Q8WXQ8 436 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 TGS1Q96RS0 853 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 NAP1L4Q99733 375 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 ANAPC7Q9UJX3 599 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 FAM187AA6NFU0 413 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 TAOK1Q7L7X3 1001 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 OTOP1Q7RTM1 612 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 SLC13A5Q86YT5 568 aaPredicted RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 C1orf131Q8NDD1 294 aaKnown RBP17.29■□□□□ 0.36
SCARB1-202ENST00000339570 PRR12Q9ULL5 1215 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 PEX3P56589 373 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 ERICH1Q86X53 443 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 CRAMP1Q96RY5 1269 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 TXLNGYQ9BZA5 131 aa17.29■□□□□ 0.36
SCARB1-202ENST00000339570 TCP10L2B9ZVM9 353 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 CYP3A4P08684 503 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 PAEPP09466 180 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 SREBF1P36956 1147 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 ITGA8P53708 1063 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 CETN1Q12798 172 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 CBWD2Q8IUF1 395 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 SLC5A5Q92911 643 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 ACSF2Q96CM8 615 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-202ENST00000339570 RSRC1Q96IZ7 334 aaKnown RBP17.28■□□□□ 0.36
SCARB1-202ENST00000339570 FAM20AQ96MK3 541 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 SNX3O60493 162 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 AGTP01019 485 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 SLC8A1P32418 973 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 MXI1P50539 228 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 RHOT2Q8IXI1 618 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-202ENST00000339570 HERPUD2Q9BSE4 406 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 KIF9Q9HAQ2 790 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 HOMER3Q9NSC5 361 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 NENFQ9UMX5 172 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-202ENST00000339570 LAMB2P55268 1798 aa17.28■□□□□ 0.36
SCARB1-202ENST00000339570 PI4K2BG5E9Z4 385 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 NCALDP61601 193 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 PADI6Q6TGC4 694 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 SH3BP5LQ7L8J4 393 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 PLEKHO2Q8TD55 490 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 MIEF2Q96C03 454 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 R3HDM2Q9Y2K5 976 aaKnown RBP17.27■□□□□ 0.36
SCARB1-202ENST00000339570 NCANO14594 1321 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 GOLGA8SH3BPF8 625 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 GOLGA8MH3BSY2 632 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 MGRN1O60291 552 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 GAP43P17677 238 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 CHRNB2P17787 502 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 PDE6CP51160 858 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 NPEPPSP55786 919 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 SESN3P58005 492 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 SEC14L1Q92503 715 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 PGM2Q96G03 612 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 HSD17B14Q9BPX1 270 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 INTUQ9ULD6 942 aa17.27■□□□□ 0.36
SCARB1-202ENST00000339570 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
SCARB1-202ENST00000339570 RREB1Q92766 1687 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 CYP3A7-CYP3A51PA0A087WV96 503 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 NUDT17P0C025 328 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 CETPP11597 493 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 NQO1P15559 274 aaKnown RBP17.27■□□□□ 0.35
SCARB1-202ENST00000339570 CYP3A7P24462 503 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 PSMC4P43686 418 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 DNAJC3Q13217 504 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 PLA2G4FQ68DD2 849 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 FITM2Q8N6M3 262 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 ETNK1Q9HBU6 452 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.35
SCARB1-202ENST00000339570 GGA2Q9UJY4 613 aa17.27■□□□□ 0.35
SCARB1-202ENST00000339570 MYH11P35749 1972 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 DNAJC8O75937 253 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-202ENST00000339570 SUN1O94901 812 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 GYS1P13807 737 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 CD58P19256 250 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 NOVP48745 357 aa17.26■□□□□ 0.35
SCARB1-202ENST00000339570 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
SCARB1-202ENST00000339570 LACTB2Q53H82 288 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms