RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 S100BP04271 92 aaPredicted RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 KRT7P08729 469 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 GRIK1P39086 918 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 EFHC2Q5JST6 749 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 PPFIBP2Q8ND30 876 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 HDAC11Q96DB2 347 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 FZD1Q9UP38 647 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 SART1O43290 800 aaKnown RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 PMLP29590 882 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 THPOP40225 353 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 USP50Q70EL3 339 aaPredicted RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 FAF2Q96CS3 445 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 CFAP57Q96MR6 1250 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 KLHL14Q9P2G3 628 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 ANGPTL3Q9Y5C1 460 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 CD4P01730 458 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 VIL1P09327 827 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 NOTUMQ6P988 496 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 NDUFAF2Q8N183 169 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 ATP6V1E2Q96A05 226 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 FMO2Q99518 471 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 AGPAT1Q99943 283 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 KLC2Q9H0B6 622 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 SLC38A7Q9NVC3 462 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 COG7P83436 770 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 SLMAPQ14BN4 828 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 PYROXD1Q8WU10 500 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 TUBE1Q9UJT0 475 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 DIS3Q9Y2L1 958 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 ALDH1A1P00352 501 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 CLCN3P51790 818 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 ZNF211Q13398 564 aaPredicted RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 PPP2R3CQ969Q6 453 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 P2RX7Q99572 595 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 PXMP2Q9NR77 195 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 CAPN11Q9UMQ6 739 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 EIF3DO15371 548 aaKnown RBP eCLIP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 GAS2O43903 313 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 MYBL1P10243 752 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 NNMTP40261 264 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 IFNAR2P48551 515 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 RNF10Q8N5U6 811 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 LRRC8CQ8TDW0 803 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 C18orf8Q96DM3 657 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 NUDCD1Q96RS6 583 aa15.98■□□□□ 0.15
C9orf47-201ENST00000334490 TRIM56Q9BRZ2 755 aaKnown RBP15.98■□□□□ 0.15
C9orf47-201ENST00000334490 SUPT20HL2P0C7V6 817 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 RALAP11233 206 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 SLCO1A2P46721 670 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 CENPUQ71F23 418 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 CFAP36Q96G28 342 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 DDX23Q9BUQ8 820 aaKnown RBP15.97■□□□□ 0.15
C9orf47-201ENST00000334490 C17orf75Q9HAS0 396 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 GPRC5CQ9NQ84 441 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 PIK3R2O00459 728 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 VWA5AO00534 786 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 MED24O75448 989 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 IL18RAPO95256 599 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 OR1G1P47890 313 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 BCAR1P56945 870 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 CDK17Q00537 523 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 ARHGAP24Q8N264 748 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 PDE11AQ9HCR9 933 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 MED4Q9NPJ6 270 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 GPRC5DQ9NZD1 345 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 TBK1Q9UHD2 729 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 GPC4O75487 556 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 NPTXRO95502 500 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 HLA-DRAP01903 254 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 TAL1P17542 331 aaPredicted RBP15.97■□□□□ 0.15
C9orf47-201ENST00000334490 TMED2Q15363 201 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 GRIK5Q16478 980 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 STK33Q9BYT3 514 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 UCHL3P15374 230 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 RGS7P49802 495 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 RFFLQ8WZ73 363 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 TTC25Q96NG3 672 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 RUSC1Q9BVN2 902 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 PARVAQ9NVD7 372 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 SNX24Q9Y343 169 aa15.97■□□□□ 0.15
C9orf47-201ENST00000334490 MT-ND3P03897 115 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 SCP2P22307 547 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 RHOT1Q8IXI2 618 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 TRIM62Q9BVG3 475 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 EXOC1LA0A1B0GW35 172 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 KRT3P12035 628 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 GRB10Q13322 594 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms