RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM83GA6ND36 823 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 PSMD14O00487 310 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 RGS5O15539 181 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 BAIAP3O94812 1187 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 GLG1Q92896 1179 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF556Q9HAH1 456 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 SCN3BQ9NY72 215 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 MATN2O00339 956 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 FESP07332 822 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 GSPT1P15170 499 aaKnown RBP10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 ITGAXP20702 1163 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 ERP27Q96DN0 273 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 CEP44Q9C0F1 390 aa10.9□□□□□ -0.66
SPTBN1-201ENST00000333896 A0A0B4J269 797 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 PGM3O95394 542 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 CFBP00751 764 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 TUBB3Q13509 450 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 TBC1D12O60347 775 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 KLHL24Q6TFL4 600 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 SLFN12Q8IYM2 578 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 ANKRD36BP1Q96IX9 119 aa10.9□□□□□ -0.67
SPTBN1-201ENST00000333896 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 LRRC74BQ6ZQY2 392 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CPXCR1Q8N123 301 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CLEC4FQ8N1N0 589 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 SPRTNQ9H040 489 aaPredicted RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 PLGRKTQ9HBL7 147 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TRIM39Q9HCM9 518 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 MAN1B1Q9UKM7 699 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 KCNJ14Q9UNX9 436 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 ABCC4O15439 1325 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 SMAPO00193 183 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 PRPF4O43172 522 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■□□□□ 9.5
SPTBN1-201ENST00000333896 LRRN2O75325 713 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 SP100P23497 879 aaPredicted RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CSTF3Q12996 717 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 ANKRD13CQ8N6S4 541 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 NYXQ9GZU5 481 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TP53BP2Q13625 1128 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 KSR2Q6VAB6 950 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 PPP1R14AQ96A00 147 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 AP1M1Q9BXS5 423 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 hCG_1642624A0A1W2PR95 340 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 FCGR1AP12314 374 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 EIF4A3P38919 411 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TTC27Q6P3X3 843 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM178BQ8IXR5 827 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 HSPH1Q92598 858 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 NMD3Q96D46 503 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CEP95Q96GE4 821 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 JAK2O60674 1132 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 C1orf228Q6PIY5 440 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 PDCD10Q9BUL8 212 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 LGALS16A8MUM7 142 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CSPG5O95196 566 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 RESP18Q5W5W9 173 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 WDR24Q96S15 920 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 WDR12Q9GZL7 423 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 VPS54Q9P1Q0 977 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 C21orf2O43822 256 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CENPAP49450 140 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 ITGA9Q13797 1035 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 ZBTB8OSQ8IWT0 167 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 REXO1Q8N1G1 1221 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 P2RX5Q93086 422 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 CENPTQ96BT3 561 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 TMED5Q9Y3A6 229 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 SHANK2Q9UPX8 1470 aa10.89□□□□□ -0.67
SPTBN1-201ENST00000333896 MAST3O60307 1309 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ABCE1P61221 599 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 DGCR14Q96DF8 476 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ZWILCHQ9H900 591 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 PALMO75781 387 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 FAM58BPP0C7Q3 252 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 SLC1A4P43007 532 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 DLG4P78352 724 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 ZCWPW1Q9H0M4 648 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 WNT8AQ9H1J5 351 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 MLXIPLQ9NP71 852 aa10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 NIP7Q9Y221 180 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPTBN1-201ENST00000333896 H3BNX3 289 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms