RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 C4orf33Q8N1A6 199 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 TEX9Q8N6V9 391 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 PRELID2Q8N945 189 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 NRG4Q8WWG1 115 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 PREBQ9HCU5 417 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 KRT36O76013 467 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 AGTP01019 485 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 NUDT17P0C025 328 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 MTMR2Q13614 643 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 CBWD6Q4V339 395 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 MDH1BQ5I0G3 518 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 CBWD3Q5JTY5 395 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 CBWD5Q5RIA9 395 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 SYCP2LQ5T4T6 812 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 RASIP1Q5U651 963 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 DSTYKQ6XUX3 929 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 SLC30A5Q8TAD4 765 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 MOV10L1Q9BXT6 1211 aaKnown RBP11.9□□□□□ -0.5
CCDC87-201ENST00000333861 PITPNM3Q9BZ71 974 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 ANKIB1Q9P2G1 1089 aa11.9□□□□□ -0.5
CCDC87-201ENST00000333861 USP17L10C9JJH3 530 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 CLDN3O15551 220 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 BANF1O75531 89 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 CYP11B2P19099 503 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 GSTT1P30711 240 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 MAGEA10P43363 369 aaPredicted RBP11.9□□□□□ -0.51
CCDC87-201ENST00000333861 GNAQP50148 359 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 USH1GQ495M9 461 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 COL23A1Q86Y22 540 aaPredicted RBP11.9□□□□□ -0.51
CCDC87-201ENST00000333861 MAIP1Q8WWC4 291 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 PRR11Q96HE9 360 aaPredicted RBP11.9□□□□□ -0.51
CCDC87-201ENST00000333861 DYDC2Q96IM9 177 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 KCTD10Q9H3F6 313 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 CDC42EP4Q9H3Q1 356 aaKnown RBP11.9□□□□□ -0.51
CCDC87-201ENST00000333861 AIPL1Q9NZN9 384 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 DCTN4Q9UJW0 460 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 CHKBQ9Y259 395 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 STXBP5LQ9Y2K9 1186 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 ALG6Q9Y672 507 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 NUMBLQ9Y6R0 609 aa11.9□□□□□ -0.51
CCDC87-201ENST00000333861 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 NVLO15381 856 aaKnown RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 NPTXRO95502 500 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 CPA2P48052 419 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 RCAN1P53805 252 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 SCG3Q8WXD2 468 aaKnown RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 LY75O60449 1722 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 O00370 1275 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 FLOT1O75955 427 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 CLSTN1O94985 981 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 GJB6O95452 261 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 CDK8P49336 464 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 RCN1Q15293 331 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 TMED2Q15363 201 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 PRR16Q569H4 304 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 NDNQ99608 321 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 HERPUD2Q9BSE4 406 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 NT5C3AQ9H0P0 336 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 CHCHD3Q9NX63 227 aaKnown RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
CCDC87-201ENST00000333861 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.89□□□□□ -0.51
CCDC87-201ENST00000333861 POC1B-GALNT4F8VUJ3 575 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 GOLGA8RI6L899 631 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 FOXN3O00409 490 aaPredicted RBP11.88□□□□□ -0.51
CCDC87-201ENST00000333861 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
CCDC87-201ENST00000333861 ADRA2BP18089 450 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
CCDC87-201ENST00000333861 NEK3P51956 506 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 PTENP60484 403 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 DLG4P78352 724 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 SNX30Q5VWJ9 437 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 TAOK1Q7L7X3 1001 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 LRRC8CQ8TDW0 803 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 SCOCQ9UIL1 159 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 TTC7AQ9ULT0 858 aaPredicted RBP11.88□□□□□ -0.51
CCDC87-201ENST00000333861 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 SERPINB2P05120 415 aa11.88□□□□□ -0.51
CCDC87-201ENST00000333861 COMTP21964 271 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms