RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 DAPK3O43293 454 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 LRRN2O75325 713 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 CCNE2O96020 404 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 DPEP1P16444 411 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 LSP1P33241 339 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
CCDC172-201ENST00000333254 MDH1P40925 334 aaKnown RBP11.57□□□□□ -0.56
CCDC172-201ENST00000333254 NPTX2P47972 431 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 PEX5P50542 639 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 PEX3P56589 373 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 CLDN10P78369 228 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 CDR2Q01850 454 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF844Q08AG5 666 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 FBXL13Q8NEE6 735 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 REPS2Q8NFH8 660 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 HELQQ8TDG4 1101 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 ALG3Q92685 438 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 SLCO2A1Q92959 643 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 NT5C1BQ96P26 610 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 FMO2Q99518 471 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 AS3MTQ9HBK9 375 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 KIAA1586Q9HCI6 787 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 ZDHHC18Q9NUE0 388 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 CTTNBP2NLQ9P2B4 639 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 ZNF112Q9UJU3 913 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 MYPNQ86TC9 1320 aa11.57□□□□□ -0.56
CCDC172-201ENST00000333254 A0A087WUV0 522 aaPredicted RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 VWA5AO00534 786 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 SLC16A4O15374 487 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 DGAT1O75907 488 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 STBD1O95210 358 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 EIF2AK2P19525 551 aaKnown RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 CNGA1P29973 690 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 ADSSP30520 456 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 FNTAP49354 379 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 FMO1Q01740 532 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 PTGISQ16647 500 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 DCAF15Q66K64 600 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 PPP1R2P3Q6NXS1 205 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 YTHDF3Q7Z739 585 aaKnown RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 NOP9Q86U38 636 aaKnown RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 TRERF1Q96PN7 1200 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 TMEM109Q9BVC6 243 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 AVENQ9NQS1 362 aaPredicted RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 SLC12A6Q9UHW9 1150 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 LCMT1Q9UIC8 334 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
CCDC172-201ENST00000333254 PTPRFP10586 1907 aa11.56□□□□□ -0.56
CCDC172-201ENST00000333254 TISP43B9A030 160 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 MYO1FO00160 1098 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ATP9AO75110 1047 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PTGIRP43119 386 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PDE6CP51160 858 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 TGFB2P61812 414 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CYP24A1Q07973 514 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PDCLQ13371 301 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ANO5Q75V66 913 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 HOOK3Q86VS8 718 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 JAMLQ86YT9 394 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 GPD1LQ8N335 351 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 SH2D3CQ8N5H7 860 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 TRIM11Q96F44 468 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PLVAPQ9BX97 442 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 RPAP3Q9H6T3 665 aaPredicted RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CNOT10Q9H9A5 744 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 SEPT11Q9NVA2 429 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ARHGAP28Q9P2N2 729 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CNOT7Q9UIV1 285 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 DENND3A2RUS2 1198 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 ANKRD63C9JTQ0 380 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 SGPL1O95470 568 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PIGRP01833 764 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PSAPP07602 524 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 NR3C2P08235 984 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 MYBL1P10243 752 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CYP11B1P15538 503 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 KCNA2P16389 499 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 CCT5P48643 541 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 BACE1P56817 501 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 PRPF4BQ13523 1007 aaKnown RBP11.55□□□□□ -0.56
CCDC172-201ENST00000333254 FAM102BQ5T8I3 360 aa11.55□□□□□ -0.56
CCDC172-201ENST00000333254 SLC39A4Q6P5W5 647 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms