RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 PTPN22Q9Y2R2 807 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 UBE4BO95155 1302 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 STBD1O95210 358 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 TUBBP07437 444 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 MAPTP10636 758 aaKnown RBP19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 MUTP22033 750 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 SFNP31947 248 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 IFI16Q16666 785 aaKnown RBP19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 TTMPQ5BVD1 217 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 LRRC71Q8N4P6 559 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 RNPC3Q96LT9 517 aaKnown RBP19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 SYT11Q9BT88 431 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 HAPLN2Q9GZV7 340 aa19.59■□□□□ 0.73
LYSMD4-201ENST00000332728 IRF6O14896 467 aa19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 HSF2BPO75031 334 aa19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 SRGAP2CP0DJJ0 459 aa19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 SF3A3Q12874 501 aaKnown RBP eCLIP19.58■□□□□ 0.739e-7■■■■□ 24.7
LYSMD4-201ENST00000332728 EMC2Q15006 297 aa19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 ZNF572Q7Z3I7 529 aaPredicted RBP19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 FBXL5Q9UKA1 691 aa19.58■□□□□ 0.73
LYSMD4-201ENST00000332728 C10orf76Q5T2E6 689 aa19.58■□□□□ 0.72
LYSMD4-201ENST00000332728 MAP4K3Q8IVH8 894 aa19.58■□□□□ 0.72
LYSMD4-201ENST00000332728 ZNF653Q96CK0 615 aa19.58■□□□□ 0.72
LYSMD4-201ENST00000332728 STXBP5LQ9Y2K9 1186 aa19.58■□□□□ 0.72
LYSMD4-201ENST00000332728 AFG3L2Q9Y4W6 797 aa19.58■□□□□ 0.72
LYSMD4-201ENST00000332728 TMEM253P0C7T8 217 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 COMTP21964 271 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 KCNJ1P48048 391 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ZNF394Q53GI3 561 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 GJC2Q5T442 439 aaPredicted RBP19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 KRT39Q6A163 491 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 COPS5Q92905 334 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 EXOC4Q96A65 974 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 RAB20Q9NX57 234 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 DDX3YO15523 660 aaKnown RBP19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 HPDP32754 393 aaPredicted RBP19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 KIF22Q14807 665 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 NFIL3Q16649 462 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 CFAP58Q5T655 872 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ABHD15Q6UXT9 468 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 IFT74Q96LB3 600 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 NUP85Q9BW27 656 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ATP6V0A4Q9HBG4 840 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ZNF302Q9NR11 478 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 GDF3Q9NR23 364 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ANKEF1Q9NU02 776 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 FBXO40Q9UH90 709 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 UMODL1Q5DID0 1318 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 SMIM23A6NLE4 172 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 FMO1Q01740 532 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 CYP24A1Q07973 514 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 UBAP2Q5T6F2 1119 aaKnown RBP19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 UBLCP1Q8WVY7 318 aaPredicted RBP19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 GPRASP2Q96D09 838 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 C18orf8Q96DM3 657 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 TCHPQ9BT92 498 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 MED4Q9NPJ6 270 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 SNCAIPQ9Y6H5 919 aa19.57■□□□□ 0.72
LYSMD4-201ENST00000332728 ANKRD62A6NC57 917 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 LYPLA2O95372 231 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 HELQQ8TDG4 1101 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 HES6Q96HZ4 224 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 RSPH14Q9UHP6 348 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 ZNF112Q9UJU3 913 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 ZNF233A6NK53 670 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 SPOPO43791 374 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 ZBTB48P10074 688 aaPredicted RBP19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 CYP11B1P15538 503 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 PAK2Q13177 524 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 STXBP2Q15833 593 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 FAM182AQ5T1J6 154 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 FBXL13Q8NEE6 735 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 SCFD2Q8WU76 684 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 NT5C1BQ96P26 610 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 EXOC7Q9UPT5 735 aa19.56■□□□□ 0.72
LYSMD4-201ENST00000332728 SSC5DA1L4H1 1573 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 ZEB2O60315 1214 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SUPT20HL2P0C7V6 817 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 UBA1P22314 1058 aaKnown RBP19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 PPATQ06203 517 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SNX1Q13596 522 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 GNPTABQ3T906 1256 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SUPT20HL1Q3ZLR7 823 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 FAM76AQ8TAV0 307 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 PBKQ96KB5 322 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 FNBP1Q96RU3 617 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SUCLA2Q9P2R7 463 aaPredicted RBP19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 PLAAQ9Y263 795 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SNX24Q9Y343 169 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 TNFSF9P41273 254 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 SSR1P43307 286 aaKnown RBP19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 PDCLQ13371 301 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 CEP85LQ5SZL2 805 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 MIS18BP1Q6P0N0 1132 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 LEKR1Q6ZMV7 388 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 KCTD17Q8N5Z5 321 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 DEPTORQ8TB45 409 aa19.55■□□□□ 0.72
LYSMD4-201ENST00000332728 HOXC10Q9NYD6 342 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms