RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 DCAF4L1Q3SXM0 396 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 ISM2Q6H9L7 571 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 SMYD4Q8IYR2 804 aaPredicted RBP28.41■■■□□ 2.14
SMDT1-201ENST00000331479 SYCP3Q8IZU3 236 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 CEP120Q8N960 986 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 NUP62CLQ9H1M0 184 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 TMEM206Q9H813 350 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 EXOC7Q9UPT5 735 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 COL4A6Q14031 1691 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 CLDN3O15551 220 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 HARSP12081 509 aaKnown RBP28.41■■■□□ 2.14
SMDT1-201ENST00000331479 HTRA4P83105 476 aaPredicted RBP28.41■■■□□ 2.14
SMDT1-201ENST00000331479 MCL1Q07820 350 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 BMT2Q1RMZ1 405 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 LRIT3Q3SXY7 679 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 AGMOQ6ZNB7 445 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 APOL6Q9BWW8 343 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 MAPK8IP1Q9UQF2 711 aa28.41■■■□□ 2.14
SMDT1-201ENST00000331479 UBE4BO95155 1302 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 TLL1O43897 1013 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 AKAP5P24588 427 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 ADSSP30520 456 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 NOLC1Q14978 699 aaKnown RBP eCLIP28.4■■■□□ 2.14
SMDT1-201ENST00000331479 CLLU1OSQ5K130 101 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 PBX4Q9BYU1 374 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 RC3H2Q9HBD1 1191 aaKnown RBP28.4■■■□□ 2.14
SMDT1-201ENST00000331479 SNTG2Q9NY99 539 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 KIAA1468Q9P260 1216 aa28.4■■■□□ 2.14
SMDT1-201ENST00000331479 MCF2P10911 925 aa28.39■■■□□ 2.14
SMDT1-201ENST00000331479 MATR3P43243 847 aaKnown RBP eCLIP28.39■■■□□ 2.14
SMDT1-201ENST00000331479 ZNF689Q96CS4 500 aaPredicted RBP28.39■■■□□ 2.14
SMDT1-201ENST00000331479 PGBD4Q96DM1 585 aa28.39■■■□□ 2.14
SMDT1-201ENST00000331479 YME1L1Q96TA2 773 aa28.39■■■□□ 2.14
SMDT1-201ENST00000331479 RAD9AQ99638 391 aa28.39■■■□□ 2.14
SMDT1-201ENST00000331479 RNF216Q9NWF9 866 aaPredicted RBP28.39■■■□□ 2.14
SMDT1-201ENST00000331479 STYXL1Q9Y6J8 313 aa28.39■■■□□ 2.14
SMDT1-201ENST00000331479 A0A0B4J269 797 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 LCHNA4D1U4 455 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 BIN1O00499 593 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 TGFB1I1O43294 461 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 ITGA4P13612 1032 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 SEZ6Q53EL9 994 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 ZNF658Q5TYW1 1059 aaPredicted RBP28.38■■■□□ 2.13
SMDT1-201ENST00000331479 TMEM192Q8IY95 271 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 YBX2Q9Y2T7 364 aaKnown RBP28.38■■■□□ 2.13
SMDT1-201ENST00000331479 INSL6Q9Y581 213 aa28.38■■■□□ 2.13
SMDT1-201ENST00000331479 BMP6P22004 513 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 AFF1P51825 1210 aaKnown RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 OSTNP61366 133 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 KNOP1Q1ED39 458 aaKnown RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 APBB1IPQ7Z5R6 666 aaPredicted RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 THNSL1Q8IYQ7 743 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 HELQQ8TDG4 1101 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 GBP3Q9H0R5 595 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 FNDC1Q4ZHG4 1894 aaPredicted RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 SMAD3P84022 425 aaKnown RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 PAN2Q504Q3 1202 aaKnown RBP28.37■■■□□ 2.13
SMDT1-201ENST00000331479 CASD1Q96PB1 797 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 RSAD1Q9HA92 442 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 PCDHA11Q9Y5I1 949 aa28.37■■■□□ 2.13
SMDT1-201ENST00000331479 FAM189A1O60320 539 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 OFD1O75665 1012 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 GRM5P41594 1212 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 MORC3Q14149 939 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 ZBTB41Q5SVQ8 909 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 POMGNT1Q8WZA1 660 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 CBWD1Q9BRT8 395 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 MSTO1Q9BUK6 570 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 KCTD10Q9H3F6 313 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 KLK14Q9P0G3 267 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 PARP2Q9UGN5 583 aa28.36■■■□□ 2.13
SMDT1-201ENST00000331479 TBKBP1A7MCY6 615 aa28.35■■■□□ 2.13
SMDT1-201ENST00000331479 SOX1O00570 391 aaPredicted RBP28.35■■■□□ 2.13
SMDT1-201ENST00000331479 RECQL4O94761 1208 aa28.35■■■□□ 2.13
SMDT1-201ENST00000331479 SLFN12LQ6IEE8 588 aa28.35■■■□□ 2.13
SMDT1-201ENST00000331479 HACE1Q8IYU2 909 aa28.35■■■□□ 2.13
SMDT1-201ENST00000331479 CXCL16Q9H2A7 254 aa28.35■■■□□ 2.13
SMDT1-201ENST00000331479 CHD9Q3L8U1 2897 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 CDH23Q9H251 3354 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 HOXA2O43364 376 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 ARHGEF15O94989 841 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 MLH1P40692 756 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 PRCPP42785 496 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 GLB1LQ6UWU2 654 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 GUF1Q8N442 669 aaKnown RBP28.34■■■□□ 2.13
SMDT1-201ENST00000331479 ZSWIM2Q8NEG5 633 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 SP7Q8TDD2 431 aaPredicted RBP28.34■■■□□ 2.13
SMDT1-201ENST00000331479 ZFP42Q96MM3 310 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 GAD1Q99259 594 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 TMEM117Q9H0C3 514 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 AGPAT3Q9NRZ7 376 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 INPP5FQ9Y2H2 1132 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 GIT1Q9Y2X7 761 aa28.34■■■□□ 2.13
SMDT1-201ENST00000331479 OGTO15294 1046 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 CA3P07451 260 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 TNFSF9P41273 254 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 ABI1Q8IZP0 508 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 PCIF1Q9H4Z3 704 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 UBN1Q9NPG3 1134 aa28.33■■■□□ 2.13
SMDT1-201ENST00000331479 HCSTQ9UBK5 93 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms