RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 POLR2AP24928 1970 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CYP24A1Q07973 514 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 TTMPQ5BVD1 217 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CYFIP1Q7L576 1253 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 RHOT2Q8IXI1 618 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 MCPH1Q8NEM0 835 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 DHX38Q92620 1227 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 MFSD14AQ96MC6 490 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 CELF4Q9BZC1 486 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 ALG6Q9Y672 507 aa16.03■□□□□ 0.16
CLCNKA-201ENST00000331433 TTI1O43156 1089 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 COPB2P35606 906 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 MFAP3P55082 362 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 GPC5P78333 572 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 SV2AQ7L0J3 742 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 WHAMMQ8TF30 809 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 PI4K2AQ9BTU6 479 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 CALCOCO1Q9P1Z2 691 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
CLCNKA-201ENST00000331433 OPA1O60313 960 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 RTN2O75298 545 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 GPC3P51654 580 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 MCCD1P59942 119 aaPredicted RBP16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 FMO1Q01740 532 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 CFAP58Q5T655 872 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 AADACL2Q6P093 401 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 IQCKQ8N0W5 287 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 PIK3R5Q8WYR1 880 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 TATDN2Q93075 761 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 NT5C1BQ96P26 610 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 NEUROG2Q9H2A3 272 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 RAB20Q9NX57 234 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 HOXC10Q9NYD6 342 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 GPRC5DQ9NZD1 345 aa16.02■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNF233A6NK53 670 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 GOLGA8KD6RF30 607 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 CALCAP01258 141 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 SUPT20HL2P0C7V6 817 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 MARCKSL1P49006 195 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 SUPT20HL1Q3ZLR7 823 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 LMBRD2Q68DH5 695 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 MIS18BP1Q6P0N0 1132 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 GPD1LQ8N335 351 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 MREGQ8N565 214 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 TMC2Q8TDI7 906 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 KRT35Q92764 455 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 UPF1Q92900 1129 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 TMEM143Q96AN5 459 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 CARD9Q9H257 536 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 ARHGAP28Q9P2N2 729 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 TTC7AQ9ULT0 858 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 DAPK3O43293 454 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 CYP11B1P15538 503 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 ATP4AP20648 1035 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 PPFIA1Q13136 1202 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 BRDTQ58F21 947 aaPredicted RBP16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 TREML2Q5T2D2 321 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
CLCNKA-201ENST00000331433 POLGP54098 1239 aaPredicted RBP16■□□□□ 0.15
CLCNKA-201ENST00000331433 HADHBP55084 474 aaKnown RBP16■□□□□ 0.15
CLCNKA-201ENST00000331433 CUL1Q13616 776 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 MESDQ14696 234 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 EMC2Q15006 297 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
CLCNKA-201ENST00000331433 XKR3Q5GH77 459 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 KCTD16Q68DU8 428 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 ANKRD35Q8N283 1001 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16■□□□□ 0.15
CLCNKA-201ENST00000331433 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 SLITRK6Q9H5Y7 841 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 ERVK-5Q9HDB9 667 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
CLCNKA-201ENST00000331433 RTP1P59025 263 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 C11orf63Q6NUN7 778 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 FOXR1Q6PIV2 292 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 LRRC31Q6UY01 552 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 CPNE8Q86YQ8 564 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 CCDC125Q86Z20 511 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 SH2D3CQ8N5H7 860 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 BTBD6Q96KE9 485 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 TRIM51Q9BSJ1 452 aa16■□□□□ 0.15
CLCNKA-201ENST00000331433 BHMG1C9JSJ3 638 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 STAM2O75886 525 aa15.99■□□□□ 0.15
CLCNKA-201ENST00000331433 GZMAP12544 262 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms