RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 AKAP5P24588 427 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 GUCY2CP25092 1073 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 THPOP40225 353 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 MOGSQ13724 837 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 CAPSQ13938 189 aa17.16■□□□□ 0.34
PDGFB-201ENST00000331163 DHX38Q92620 1227 aaKnown RBP17.16■□□□□ 0.34
PDGFB-201ENST00000331163 CA12O43570 354 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 VEGFBP49765 207 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 IFRD2Q12894 506 aaPredicted RBP17.15■□□□□ 0.34
PDGFB-201ENST00000331163 CBWD6Q4V339 395 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 CBWD3Q5JTY5 395 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 CBWD5Q5RIA9 395 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 GOLGA5Q8TBA6 731 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 LAMA2P24043 3122 aaKnown RBP17.15■□□□□ 0.34
PDGFB-201ENST00000331163 BFSP1Q12934 665 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 LRRC55Q6ZSA7 311 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 TMEM161BQ8NDZ6 487 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 PCYT2Q99447 389 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 C1orf112Q9NSG2 853 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 RNF186Q9NXI6 227 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 TREHO43280 583 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 PHKA2P46019 1235 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 DRAP1Q14919 205 aaPredicted RBP17.15■□□□□ 0.34
PDGFB-201ENST00000331163 KIAA0319LQ8IZA0 1049 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
PDGFB-201ENST00000331163 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 DUSP10Q9Y6W6 482 aa17.15■□□□□ 0.34
PDGFB-201ENST00000331163 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 PPFIA4O75335 1185 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 MAPK7Q13164 816 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 CCDC181Q5TID7 509 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 EEF1DP3Q658K8 133 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 NFRKBQ6P4R8 1299 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 FUT8Q9BYC5 575 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
PDGFB-201ENST00000331163 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 UPP2O95045 317 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 SLC10A3P09131 477 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 WEE2P0C1S8 567 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 CXCL8P10145 99 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 FMO5P49326 533 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 ATF7IP2Q5U623 682 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 TAS1R2Q8TE23 839 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 RNF208Q9H0X6 261 aa17.14■□□□□ 0.33
PDGFB-201ENST00000331163 RPF1Q9H9Y2 349 aaKnown RBP17.14■□□□□ 0.33
PDGFB-201ENST00000331163 HYIQ5T013 277 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 GPD1LQ8N335 351 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 KCTD10Q9H3F6 313 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 PCDHB4Q9Y5E5 795 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 INHBEP58166 350 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 MTMR12Q9C0I1 747 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 HAUS4Q9H6D7 363 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 PRDM5Q9NQX1 630 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-201ENST00000331163 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 ADRB2P07550 413 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 CCND3P30281 292 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-201ENST00000331163 HOXD13P35453 343 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 ACTN2P35609 894 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 PPARDQ03181 441 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 ARHGAP1Q07960 439 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
PDGFB-201ENST00000331163 NT5C1BQ96P26 610 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 NUP58Q9BVL2 599 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 DBR1Q9UK59 544 aaKnown RBP17.13■□□□□ 0.33
PDGFB-201ENST00000331163 USTQ9Y2C2 406 aa17.13■□□□□ 0.33
PDGFB-201ENST00000331163 MYADML2A6NDP7 307 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 CYP26A1O43174 497 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 GHRP10912 638 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 HOXD10P28358 340 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ZBED6P86452 979 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 MFSD10Q14728 455 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 DUSP28Q4G0W2 176 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 TMEM270Q6UE05 265 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 INTS2Q9H0H0 1204 aaKnown RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ZEB2O60315 1214 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 NPTXRO95502 500 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ABL1P00519 1130 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 AKR1A1P14550 325 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 UCHL3P15374 230 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 LACTBP83111 547 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 PPP3CAQ08209 521 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ZNF792Q3KQV3 632 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 WDR72Q3MJ13 1102 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 IER5Q5VY09 327 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ZNF507Q8TCN5 953 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ABCB6Q9NP58 842 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 NDUFA10O95299 355 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 SRLQ86TD4 932 aa17.12■□□□□ 0.33
PDGFB-201ENST00000331163 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
PDGFB-201ENST00000331163 HASPINQ8TF76 798 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms