RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CACNB3P54284 484 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 MRPS35P82673 323 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 PARP6Q2NL67 630 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ZNF568Q3ZCX4 644 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 CMPK2Q5EBM0 449 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 CWF19L1Q69YN2 538 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 CCDC137Q6PK04 289 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 TRMT10CQ7L0Y3 403 aaKnown RBP19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 LMNTD2Q8IXW0 634 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 ZDHHC14Q8IZN3 488 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 SGIP1Q9BQI5 828 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 SYT11Q9BT88 431 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 THAP2Q9H0W7 228 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
CLSTN3-202ENST00000331148 PITPNM2Q9BZ72 1349 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 CALUO43852 315 aaPredicted RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 ATP5DP30049 168 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 PAPOLAP51003 745 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 ACVR2BQ13705 512 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 RRP1BQ14684 758 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 MFN1Q8IWA4 741 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 ZFPM1Q8IX07 1006 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 LRMDAQ9H2I8 198 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 DHX36Q9H2U1 1008 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 CDC42EP4Q9H3Q1 356 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 RIOX1Q9H6W3 641 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 METTL14Q9HCE5 456 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 PCDHA12Q9UN75 941 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 LRRD1A4D1F6 860 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 SLC16A3O15427 465 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 GNAT1P11488 350 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 ATP6V1C1P21283 382 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 TUBP50607 506 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 RAD23BP54727 409 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 TCP10Q12799 353 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 MPP2Q14168 576 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 GNPTABQ3T906 1256 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 KRT35Q92764 455 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 PAPOLBQ9NRJ5 636 aaKnown RBP19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 CYP39A1Q9NYL5 469 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 FAM198AQ9UFP1 575 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 COL4A5P29400 1685 aa19.41■□□□□ 0.7
CLSTN3-202ENST00000331148 GTPBP10A4D1E9 387 aaKnown RBP19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 SPDYE5A6NIY4 337 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 SMIM24O75264 130 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 NPTXRO95502 500 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 ACSL3O95573 720 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 PCK1P35558 622 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 MARCKSL1P49006 195 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 CASP4P49662 377 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 MXRA7P84157 204 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 MTFR1Q15390 333 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 UBE2SQ16763 222 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 CYFIP1Q7L576 1253 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 PIGOQ8TEQ8 1089 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 STK32AQ8WU08 396 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 CEP95Q96GE4 821 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 PRMT6Q96LA8 375 aaPredicted RBP19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 TDRD3Q9H7E2 651 aaKnown RBP19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 TAS2R14Q9NYV8 317 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 CTNNAL1Q9UBT7 734 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 ALG6Q9Y672 507 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 FOXO6A8MYZ6 492 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 PDXKO00764 312 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 TTLL1O95922 423 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 NR3C1P04150 777 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 TPBGLP0DKB5 382 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 SLC12A3P55017 1021 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 EPM2AIP1Q7L775 607 aaPredicted RBP19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 UBL4BQ8N7F7 174 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 GMLQ99445 158 aa19.4■□□□□ 0.7
CLSTN3-202ENST00000331148 MIF4GDA9UHW6 222 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 MAP3K13O43283 966 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 GGPS1O95749 300 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 STX2P32856 288 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 NOVP48745 357 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 ROR2Q01974 943 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 INTS8Q75QN2 995 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 SFR1Q86XK3 245 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 APLFQ8IW19 511 aaPredicted RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 AGGF1Q8N302 714 aaeCLIP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 OGFOD1Q8N543 542 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 MAGEB18Q96M61 343 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 ZSWIM1Q9BR11 485 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 MYLK2Q9H1R3 596 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 BRCA1P38398 1863 aaKnown RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 ASTN1O14525 1302 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 FRMPD2Q68DX3 1309 aaPredicted RBP19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 PASKQ96RG2 1323 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 PDHA1P08559 390 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 BRAFP15056 766 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 GM2AP17900 193 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 RPS6KA3P51812 740 aa19.39■□□□□ 0.69
CLSTN3-202ENST00000331148 LBRQ14739 615 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms