RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SRGAP2CP0DJJ0 459 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 DLATP10515 647 aaKnown RBP18.36■□□□□ 0.53
DDX41-201ENST00000330503 ACOT2P49753 483 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 PSMD6Q15008 389 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 CDCA2Q69YH5 1023 aaPredicted RBP18.36■□□□□ 0.53
DDX41-201ENST00000330503 C15orf39Q6ZRI6 1047 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 PDCL2Q8N4E4 241 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 KIAA0391O15091 583 aaKnown RBP18.35■□□□□ 0.53
DDX41-201ENST00000330503 MSCO60682 206 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 MXD4Q14582 209 aaPredicted RBP18.35■□□□□ 0.53
DDX41-201ENST00000330503 TEX35Q5T0J7 233 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 NPLOC4Q8TAT6 608 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
DDX41-201ENST00000330503 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 EMID1Q96A84 441 aaPredicted RBP18.35■□□□□ 0.53
DDX41-201ENST00000330503 VTI1AQ96AJ9 217 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 SUCLA2Q9P2R7 463 aaPredicted RBP18.35■□□□□ 0.53
DDX41-201ENST00000330503 LGALS2P05162 132 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 MAPK4P31152 587 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 EFNA5P52803 228 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 FBXO38Q6PIJ6 1188 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 USP37Q86T82 979 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 VPS36Q86VN1 386 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 FBXL13Q8NEE6 735 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 PPTC7Q8NI37 304 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 GOLGA1Q92805 767 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 RAB20Q9NX57 234 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 ERAP1Q9NZ08 941 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 CPA4Q9UI42 421 aa18.35■□□□□ 0.53
DDX41-201ENST00000330503 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX41-201ENST00000330503 GJB1P08034 283 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 CCDC172P0C7W6 258 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
DDX41-201ENST00000330503 ZSCAN20P17040 1043 aaPredicted RBP18.34■□□□□ 0.53
DDX41-201ENST00000330503 PRPF4BQ13523 1007 aaKnown RBP18.34■□□□□ 0.53
DDX41-201ENST00000330503 RASAL3Q86YV0 1011 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 RNF149Q8NC42 400 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 RABGGTAQ92696 567 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ELMO3Q96BJ8 720 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 SNX12Q9UMY4 172 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 SLC15A5A6NIM6 579 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ZNF185O15231 689 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 EFCAB12Q6NXP0 572 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 FAM71AQ8IYT1 594 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 TATDN2Q93075 761 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
DDX41-201ENST00000330503 TINF2Q9BSI4 451 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 PDE11AQ9HCR9 933 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
DDX41-201ENST00000330503 ATP8B3O60423 1300 aa18.33■□□□□ 0.53
DDX41-201ENST00000330503 PTPRJQ12913 1337 aa18.33■□□□□ 0.53
DDX41-201ENST00000330503 NCK2O43639 380 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 PALMO75781 387 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 C22orf31O95567 290 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 C4BPAP04003 597 aaKnown RBP18.33■□□□□ 0.52
DDX41-201ENST00000330503 INSRRP14616 1297 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 SMPD1P17405 629 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 NAP1L1P55209 391 aaKnown RBP18.33■□□□□ 0.52
DDX41-201ENST00000330503 ZNF484Q5JVG2 852 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 LMBRD2Q68DH5 695 aaPredicted RBP18.33■□□□□ 0.52
DDX41-201ENST00000330503 MTERF4Q7Z6M4 381 aaKnown RBP18.33■□□□□ 0.52
DDX41-201ENST00000330503 RHPN2Q8IUC4 686 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 SLC20A1Q8WUM9 679 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 MMS19Q96T76 1030 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 ACO2Q99798 780 aaKnown RBP18.33■□□□□ 0.52
DDX41-201ENST00000330503 AGPAT1Q99943 283 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 TLR10Q9BXR5 811 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
DDX41-201ENST00000330503 CTAGE15A4D2H0 777 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 H2AFZP0C0S5 128 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 CTAGE8P0CG41 777 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 PRLRP16471 622 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 ZNF157P51786 506 aaPredicted RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 ACVR2BQ13705 512 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 CHADLQ6NUI6 762 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 H2AFVQ71UI9 128 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 CTAGE6Q86UF2 777 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 CTAGE4Q8IX94 777 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 PPM1KQ8N3J5 372 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 GPR161Q8N6U8 529 aaKnown RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 SHC3Q92529 594 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 INTUQ9ULD6 942 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 CNTNAP2Q9UHC6 1331 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 PDE2AO00408 941 aaPredicted RBP18.32■□□□□ 0.52
DDX41-201ENST00000330503 ABLIM1O14639 778 aa18.32■□□□□ 0.52
DDX41-201ENST00000330503 FAM189A1O60320 539 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms