RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CDH6P55285 790 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 OCRLQ01968 901 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 PDCLQ13371 301 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 DRP2Q13474 957 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 MTM1Q13496 603 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 GUF1Q8N442 669 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 PPM1NQ8N819 430 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 AGAP3Q96P47 875 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 TEX13BQ9BXU2 312 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RNF14Q9UBS8 474 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SNX9Q9Y5X1 595 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 CNTNAP5Q8WYK1 1306 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 ASB14A6NK59 587 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 PDCD7Q8N8D1 485 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 FBXL13Q8NEE6 735 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SP110Q9HB58 689 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 IP6K2Q9UHH9 426 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 CELF2O95319 508 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 TTC4O95801 387 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 IRF1P10914 325 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 RCAN1P53805 252 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 PRKCEQ02156 737 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 LRRC14Q15048 493 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 MAP3K21Q5TCX8 1036 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
CHD3-201ENST00000330494 SDCCAG3Q96C92 435 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 SMARCAL1Q9NZC9 954 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 KLC3Q6P597 504 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 TAAR1Q96RJ0 339 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 CYTH2Q99418 400 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 AGPAT1Q99943 283 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 VCPKMTQ9H867 229 aa10.81□□□□□ -0.68
CHD3-201ENST00000330494 ATP9BO43861 1147 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 HSPA4LO95757 839 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 KCNA4P22459 653 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 TMPRSS15P98073 1019 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 SNAPC2Q13487 334 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 AMHR2Q16671 573 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 ZBTB41Q5SVQ8 909 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PPP4R4Q6NUP7 873 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 BZW1Q7L1Q6 419 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 COL23A1Q86Y22 540 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 ATG4CQ96DT6 458 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 GTSE1Q9NYZ3 720 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 ARL4CP56559 192 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 DPYDQ12882 1025 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 STK4Q13043 487 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 SBK1Q52WX2 424 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 LRRC31Q6UY01 552 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 USP42Q9H9J4 1324 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 UBA6A0AVT1 1052 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 MAGOHP61326 146 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 TSGA10IPQ3SY00 556 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 DACT3Q96B18 629 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 ADGRG1Q9Y653 693 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 CD163L1Q9NR16 1453 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 CCDC151A5D8V7 595 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PODXLO00592 558 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 DPYSL4O14531 572 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 COPEO14579 308 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PAMP19021 973 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 SULT1E1P49888 294 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 ROR1Q01973 937 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 CUL1Q13616 776 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 HEATR6Q6AI08 1181 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 SYNDIG1LA6NDD5 238 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 TRPA1O75762 1119 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 WEE2P0C1S8 567 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PNMA6AP0CW24 399 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 SCP2P22307 547 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 FGFR4P22455 802 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 RECQLP46063 649 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 CCL15Q16663 113 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 EFCAB12Q6NXP0 572 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PDXDC1Q6P996 788 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 EPM2AIP1Q7L775 607 aaPredicted RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 ACER1Q8TDN7 264 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 MMTAG2Q9BU76 263 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 SMYD3Q9H7B4 428 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 ALG13Q9NP73 1137 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 NPEPPSP55786 919 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 PDIA2Q13087 525 aaKnown RBP10.8□□□□□ -0.68
CHD3-201ENST00000330494 ZBED8Q8IZ13 594 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 USP33Q8TEY7 942 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 KLHL29Q96CT2 875 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 AMACRQ9UHK6 382 aa10.8□□□□□ -0.68
CHD3-201ENST00000330494 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms