RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FUKQ8N0W3 1084 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ATG4AQ8WYN0 398 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ZKSCAN4Q969J2 545 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 PWWP2AQ96N64 755 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ZNF317Q96PQ6 595 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 TMEM117Q9H0C3 514 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 HOMER2Q9NSB8 354 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 RASAL2Q9UJF2 1139 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ZNFX1Q9P2E3 1918 aaKnown RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 FAM187AA6NFU0 413 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 CLDN3O15551 220 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 NUDT17P0C025 328 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 COL11A2P13942 1736 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 VPS41P49754 854 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ADCY1Q08828 1119 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 SWT1Q5T5J6 900 aaKnown RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 CEP57Q86XR8 500 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 CTNNAL1Q9UBT7 734 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 PCDHA3Q9Y5H8 950 aa18.67■□□□□ 0.58
PTP4A3-201ENST00000329397 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 MXI1P50539 228 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 CDR1P51861 262 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 PEX3P56589 373 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 SETQ01105 290 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 SPP2Q13103 211 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 DGKZQ13574 1117 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 MIER3Q7Z3K6 550 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 ZNF564Q8TBZ8 553 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 CCT6BQ92526 530 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 ZNF653Q96CK0 615 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 INTS9Q9NV88 658 aaKnown RBP18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 ZHX2Q9Y6X8 837 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 SRRM3A6NNA2 597 aaPredicted RBP18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 VIL1P09327 827 aaKnown RBP18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 CHRNA3P32297 505 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 SOX10P56693 466 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 E2F5Q15329 346 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 STRA6Q9BX79 667 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 KCNH7Q9NS40 1196 aa18.66■□□□□ 0.58
PTP4A3-201ENST00000329397 RIPK2O43353 540 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 MMP13P45452 471 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 FAM133BQ5BKY9 247 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 PLA2G4FQ68DD2 849 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 INTS8Q75QN2 995 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 TAX1BP1Q86VP1 789 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 LDHDQ86WU2 507 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 GGA2Q9UJY4 613 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 NOCTQ9UK39 431 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 NFIBO00712 420 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 CTNNA2P26232 953 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 CHRNA5P30532 468 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 UGCGQ16739 394 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 C11orf63Q6NUN7 778 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 PI4K2AQ9BTU6 479 aa18.65■□□□□ 0.58
PTP4A3-201ENST00000329397 RTN2O75298 545 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 COILP38432 576 aaPredicted RBP18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 FMO1Q01740 532 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 PPP1R7Q15435 360 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 SLC13A5Q86YT5 568 aaPredicted RBP18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 CPXCR1Q8N123 301 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 CCDC197Q8NCU1 140 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 MASTLQ96GX5 879 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 HERPUD2Q9BSE4 406 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 CNOT10Q9H9A5 744 aaKnown RBP18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 ARHGEF10LQ9HCE6 1279 aa18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 LARSQ9P2J5 1176 aaKnown RBP18.64■□□□□ 0.58
PTP4A3-201ENST00000329397 CHKAP35790 457 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 XXYLT1Q8NBI6 393 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 MTRF1LQ9UGC7 380 aaKnown RBP18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 TPX2Q9ULW0 747 aaKnown RBP18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 MIF4GDA9UHW6 222 aaKnown RBP18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 RASGRF2O14827 1237 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 RARRES1P49788 294 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 AUHQ13825 339 aaKnown RBP18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 RASA3Q14644 834 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 SIX1Q15475 284 aaPredicted RBP18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 SEPT14Q6ZU15 432 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 PGM2Q96G03 612 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 PCYOX1Q9UHG3 505 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 PFASO15067 1338 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 UBE4BO95155 1302 aa18.64■□□□□ 0.57
PTP4A3-201ENST00000329397 PCNTO95613 3336 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 CETN1Q12798 172 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 TNIP1Q15025 636 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 B3GNT9Q6UX72 402 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 RNF207Q6ZRF8 634 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 SLC9A9Q8IVB4 645 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 PARP9Q8IXQ6 854 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 CD101Q93033 1021 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 ACTR5Q9H9F9 607 aaPredicted RBP18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 CHST7Q9NS84 486 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 ABCF3Q9NUQ8 709 aa18.63■□□□□ 0.57
PTP4A3-201ENST00000329397 SERPINA10Q9UK55 444 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms