RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 STRA6Q9BX79 667 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
ATP2C1-201ENST00000328560 DENND3A2RUS2 1198 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 MIF4GDA9UHW6 222 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 RGS16O15492 202 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 SSTR3P32745 418 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 VPS41P49754 854 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 MFAP3P55082 362 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 RPS6P62753 249 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 TRIP13Q15645 432 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 CCDC38Q502W7 563 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 HOOK3Q86VS8 718 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 MCF2L2Q86YR7 1114 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 TAS1R2Q8TE23 839 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 POMGNT1Q8WZA1 660 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 RNF25Q96BH1 459 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 BICD1Q96G01 975 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 MTRF1LQ9UGC7 380 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 FAM187AA6NFU0 413 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 PPFIA2O75334 1257 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 RFX1P22670 979 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 IFNAR2P48551 515 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 IFI35P80217 286 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 DHX34Q14147 1143 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 SYTL5Q8TDW5 730 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 RMDN3Q96TC7 470 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 ZDHHC18Q9NUE0 388 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 MTUS1Q9ULD2 1270 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 SLX4Q8IY92 1834 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 CLDN3O15551 220 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 CNGA1P29973 690 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 SMTNP53814 917 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 TATDN2Q93075 761 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 PABPC3Q9H361 631 aaKnown RBP15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 ZNF536O15090 1300 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 CNTNAP1P78357 1384 aa15.09■□□□□ 0.01
ATP2C1-201ENST00000328560 CHRNA3P32297 505 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 GJC1P36383 396 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 PDE6CP51160 858 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 GTF2A1P52655 376 aaPredicted RBP15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 ZDHHC24Q6UX98 284 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 TAX1BP1Q86VP1 789 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 CLEC4DQ8WXI8 215 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 SEC14L1Q92503 715 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 KMT5AQ9NQR1 393 aa15.08■□□□□ 0.01
ATP2C1-201ENST00000328560 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 HNRNPH1P31943 449 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 SSR1P43307 286 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 HSD17B4P51659 736 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 EMC10Q5UCC4 262 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 CCDC114Q96M63 670 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 NT5C1BQ96P26 610 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 EFCC1Q9HA90 598 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 RARAP10276 462 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 CYP11B1P15538 503 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 ADSSP30520 456 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 EIF3BP55884 814 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 FMO1Q01740 532 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 DMP1Q13316 513 aaPredicted RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 TNFAIP1Q13829 316 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 ARHGEF16Q5VV41 709 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 ICE2Q659A1 982 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 KRT39Q6A163 491 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 C11orf63Q6NUN7 778 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 MMS22LQ6ZRQ5 1243 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 SPATS2Q86XZ4 545 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 TEX2Q8IWB9 1127 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 CACNA2D3Q8IZS8 1091 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 EPS8L3Q8TE67 593 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 CEP170P1Q96L14 293 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 ASIC3Q9UHC3 531 aa15.08■□□□□ 0
ATP2C1-201ENST00000328560 DBR1Q9UK59 544 aaKnown RBP15.08■□□□□ 0
ATP2C1-201ENST00000328560 BHMG1C9JSJ3 638 aaPredicted RBP15.07■□□□□ 0
ATP2C1-201ENST00000328560 CHN1P15882 459 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 DPEP1P16444 411 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 PTGER2P43116 358 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 PTGIRP43119 386 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 NPTX2P47972 431 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 ALCAMQ13740 583 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 DAB2IPQ5VWQ8 1189 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 CIAPIN1Q6FI81 312 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 LLGL2Q6P1M3 1020 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 OTUD6AQ7L8S5 288 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 SLC13A5Q86YT5 568 aaPredicted RBP15.07■□□□□ 0
ATP2C1-201ENST00000328560 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 SEC16BQ96JE7 1060 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 FAM118BQ9BPY3 351 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 TRIM7Q9C029 511 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
ATP2C1-201ENST00000328560 TBX20Q9UMR3 447 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 ATP8B3O60423 1300 aa15.07■□□□□ 0
ATP2C1-201ENST00000328560 HNRNPDLO14979 420 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms