RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RNF169Q8NCN4 708 aa4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 NEU1Q99519 415 aa4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 LRFN3Q9BTN0 628 aa4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 THG1LQ9NWX6 298 aaKnown RBP4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 TMPRSS11EQ9UL52 423 aa4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 CLCA2Q9UQC9 943 aa4.59□□□□□ -1.67
CBX3P1-201ENST00000325243 PRSS38A1L453 326 aa4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 KPNA6O60684 536 aa4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 GPR15P49685 360 aa4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 LMBR1LQ6UX01 489 aa4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 BOLLQ8N9W6 283 aaKnown RBP4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 IFT57Q9NWB7 429 aa4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 EVLQ9UI08 416 aaPredicted RBP4.58□□□□□ -1.68
CBX3P1-201ENST00000325243 SALL3Q9BXA9 1300 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 TBKBP1A7MCY6 615 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 B5MCH6 92 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 NRP2O60462 931 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 PRAMEF4O60810 478 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 GAS7O60861 476 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 TMEM127O75204 238 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 ESRRBO95718 433 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 CLEC2LP0C7M8 214 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 CDK4P11802 303 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 XPAP23025 273 aaPredicted RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 MPLP40238 635 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 PPARAQ07869 468 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 SCAPQ12770 1279 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 RESTQ13127 1097 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 PABPC4Q13310 644 aaKnown RBP eCLIP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 ERCC6LQ2NKX8 1250 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 CCDC178Q5BJE1 867 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 ABHD17BQ5VST6 288 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 EFCAB12Q6NXP0 572 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 ABHD15Q6UXT9 468 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 SLC41A1Q8IVJ1 513 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 CEP95Q96GE4 821 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 PRDM12Q9H4Q4 367 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 POGKQ9P215 609 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 MAGEC2Q9UBF1 373 aaPredicted RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 TESQ9UGI8 421 aaKnown RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 CDK11AQ9UQ88 783 aaPredicted RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 USP15Q9Y4E8 981 aaPredicted RBP4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 PPP2R3BQ9Y5P8 575 aa4.57□□□□□ -1.68
CBX3P1-201ENST00000325243 RFPL3O75679 317 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 LTA4HP09960 611 aaKnown RBP4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 RBP3P10745 1247 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 NRG3P56975 720 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 SF3A1Q15459 793 aaKnown RBP4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 BMT2Q1RMZ1 405 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 GPR158Q5T848 1215 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 SP5Q6BEB4 398 aaPredicted RBP4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 KIF18BQ86Y91 864 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 GLB1L2Q8IW92 636 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 SLC44A3Q8N4M1 653 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 MDM1Q8TC05 714 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 CDC5LQ99459 802 aaKnown RBP4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 MTFR1LQ9H019 292 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 OSBPL2Q9H1P3 480 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 PRSS50Q9UI38 385 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 FRMD4BQ9Y2L6 1034 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 NUMBLQ9Y6R0 609 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 FPGT-TNNI3KV9GXZ4 949 aa4.56□□□□□ -1.68
CBX3P1-201ENST00000325243 MAST3O60307 1309 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 ITGA10O75578 1167 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 ASMTLO95671 621 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 HLA-DOAP06340 250 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 SPATA31D3P0C874 917 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 ITGAMP11215 1152 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 MGAT1P26572 445 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 ELLP55199 621 aaPredicted RBP4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 BLOC1S1P78537 153 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 MPP3Q13368 585 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 TRIM25Q14258 630 aaKnown RBP4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 BMS1Q14692 1282 aaKnown RBP4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 MFSD14BQ5SR56 506 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 SPATA31D4Q6ZUB0 917 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 PASD1Q8IV76 773 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 ZNF610Q8N9Z0 462 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 SH3TC2Q8TF17 1288 aa4.55□□□□□ -1.68
CBX3P1-201ENST00000325243 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 ERBB2P04626 1255 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 CFIP05156 583 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 ELANEP08246 267 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 NEK4P51957 841 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 KPNA1P52294 538 aaPredicted RBP4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 CHN2P52757 468 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 MANFP55145 182 aaKnown RBP4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 PHC1P78364 1004 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 TERF2Q15554 542 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 NFE2L2Q16236 605 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 SMC1BQ8NDV3 1235 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 SLC35B2Q8TB61 432 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 NELL1Q92832 810 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 DNAJC2Q99543 621 aaKnown RBP4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 SPATA5L1Q9BVQ7 753 aa4.54□□□□□ -1.68
CBX3P1-201ENST00000325243 ANO3Q9BYT9 981 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms