RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ASB2Q96Q27 587 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 UBE2ZQ9H832 354 aaPredicted RBP16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 ENTPD7Q9NQZ7 604 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 KLK14Q9P0G3 267 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 DNAJB4Q9UDY4 337 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 TNFSF13BQ9Y275 285 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 REV3LO60673 3130 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 ZMYM2Q9UBW7 1377 aa16.11■□□□□ 0.17
TUBA3D-201ENST00000321253 ATG2AQ2TAZ0 1938 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 INPPL1O15357 1258 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 CUTAO60888 179 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 GALTP07902 379 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 SLC11A1P49279 550 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 SCNN1GP51170 649 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 GIT2Q14161 759 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 ZNF568Q3ZCX4 644 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 SV2BQ7L1I2 683 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 TMEM161BQ8NDZ6 487 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 ACO2Q99798 780 aaKnown RBP16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 TCF25Q9BQ70 676 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 TMEM175Q9BSA9 504 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 IGFLR1Q9H665 355 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 SNTG2Q9NY99 539 aa16.1■□□□□ 0.17
TUBA3D-201ENST00000321253 NR1I2O75469 434 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 DDHD2O94830 711 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 BRD1O95696 1058 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 ALDH2P05091 517 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 SCP2P22307 547 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 KCNA5P22460 613 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 ME1P48163 572 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 ERVFC1P60507 584 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 DNM1Q05193 864 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 HYAL1Q12794 435 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TAS1R3Q7RTX0 852 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TMC7Q7Z402 723 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 IGSF21Q96ID5 467 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TCHPQ9BT92 498 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TARS2Q9BW92 718 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PANK2Q9BZ23 570 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 CLDND1Q9NY35 253 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 FAN1Q9Y2M0 1017 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 BRWD1Q9NSI6 2320 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 K7ENM7 598 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 FSCN2O14926 492 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 RECQL4O94761 1208 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 OR1G1P47890 313 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 ZNF131P52739 623 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 NCKAP1LP55160 1127 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 GRIK3Q13003 919 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 DYMQ7RTS9 669 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 HAUS6Q7Z4H7 955 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TMEM173Q86WV6 379 aaPredicted RBP16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 FAM178BQ8IXR5 827 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PDILTQ8N807 584 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 BICD1Q96G01 975 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 TLE6Q9H808 572 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 STK39Q9UEW8 545 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 GDAQ9Y2T3 454 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 A0A0C4DFX4 3053 aa16.09■□□□□ 0.17
TUBA3D-201ENST00000321253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 TRAK2O60296 914 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 B4GALT3O60512 393 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ABCD1P33897 745 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 CA8P35219 290 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 NRIP1P48552 1158 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 MPZL3Q6UWV2 235 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ZPBP2Q6X784 338 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ZBTB33Q86T24 672 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 DDX12PQ92771 950 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 CCDC94Q9BW85 323 aaPredicted RBP16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 CDT1Q9H211 546 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 MIOSQ9NXC5 875 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ANKFY1Q9P2R3 1169 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 TDRD15B5MCY1 1934 aaKnown RBP16.08■□□□□ 0.16
TUBA3D-201ENST00000321253 A0A087X0B3 334 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 FSD2A1L4K1 749 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 NRP1O14786 923 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 TOM1L1O75674 476 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 MCF2P10911 925 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 HARSP12081 509 aaKnown RBP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 MATR3P43243 847 aaKnown RBP eCLIP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 DSC1Q08554 894 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 DDX53Q86TM3 631 aaKnown RBP16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 VPS52Q8N1B4 723 aa16.07■□□□□ 0.16
TUBA3D-201ENST00000321253 GSTCDQ8NEC7 633 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms