RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FAM47DPA6NHR8 397 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 RSPH10B2B2RC85 870 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 TOMM70O94826 608 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 RSPH10BP0C881 870 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 KCNA2P16389 499 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 SDC4P31431 198 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 ENOSF1Q7L5Y1 443 aa17.82■□□□□ 0.44
SMCHD1-201ENST00000320876 MARK3P27448 753 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 AP3B2Q13367 1082 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 ARID5BQ14865 1188 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 IZUMO3Q5VZ72 239 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 GREM2Q9H772 168 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 CASS4Q9NQ75 786 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 BFARQ9NZS9 450 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 SOX6P35712 828 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 AP4S1Q9Y587 144 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 FAM83BQ5T0W9 1011 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 RNF135Q8IUD6 432 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 MCPH1Q8NEM0 835 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 TMA16Q96EY4 203 aaKnown RBP17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 CCT7Q99832 543 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 MYH7P12883 1935 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 KLHL2O95198 593 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 CHN1P15882 459 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 BRD8Q9H0E9 1235 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 DDX47Q9H0S4 455 aaKnown RBP17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 SP110Q9HB58 689 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 CLK1P49759 484 aaKnown RBP17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 HDDC2Q7Z4H3 204 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 MFN1Q8IWA4 741 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 OR6B3Q8NGW1 331 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 RFFLQ8WZ73 363 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 CDYLQ9Y232 598 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 C5orf58C9J3I9 102 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 PRPF4O43172 522 aaKnown RBP eCLIP17.81■□□□□ 0.442e-6■□□□□ 9
SMCHD1-201ENST00000320876 PRCPP42785 496 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 TRIM16LQ309B1 348 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 SPATA4Q8NEY3 305 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 TMEM161AQ9NX61 479 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 IL1RAPL1Q9NZN1 696 aa17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 PSMC3IPQ9P2W1 217 aaPredicted RBP17.81■□□□□ 0.44
SMCHD1-201ENST00000320876 TRIM69Q86WT6 500 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 USE1Q9NZ43 259 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 WDR19Q8NEZ3 1342 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 H0YC42 278 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 CDH16O75309 829 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 KCNQ4P56696 695 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 MTO1Q9Y2Z2 717 aaKnown RBP17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 SLC1A1P43005 524 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 UNC5CLQ8IV45 518 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 NUP93Q8N1F7 819 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 TADA1Q96BN2 335 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 GOLGA8RI6L899 631 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 TSPAN17Q96FV3 270 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 DTX3LQ8TDB6 740 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 LRRC36Q1X8D7 754 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 GDAQ9Y2T3 454 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 ARHGEF5Q12774 1597 aa17.8■□□□□ 0.44
SMCHD1-201ENST00000320876 PEX3P56589 373 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 GANCQ8TET4 914 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 ANKS3Q6ZW76 656 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 AGR3Q8TD06 166 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 PPP1R36Q96LQ0 422 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 TOPORSQ9NS56 1045 aaPredicted RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SYBUQ9NX95 663 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 A0A1W2PQC6 194 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 STXBP2Q15833 593 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 KNOP1Q1ED39 458 aaKnown RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 STAG2Q8N3U4 1231 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 RAB42Q8N4Z0 105 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 RAD54LQ92698 747 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SGSM3Q96HU1 749 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SEC16BQ96JE7 1060 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 CSTF3Q12996 717 aaKnown RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 FTLP02792 175 aaPredicted RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 LSP1P33241 339 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 CYP2C19P33261 490 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 BCAR1P56945 870 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 COASYQ13057 564 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 ELMOD1Q8N336 334 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 MYH9P35579 1960 aaKnown RBP17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SLC16A2P36021 539 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 PIK3R5Q8WYR1 880 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 COA7Q96BR5 231 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 OPTNQ96CV9 577 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 SCN3BQ9NY72 215 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
SMCHD1-201ENST00000320876 ADGRG1Q9Y653 693 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms