RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 GNAZP19086 355 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TAC1P20366 129 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 COMTP21964 271 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CA4P22748 312 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SP100P23497 879 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CYP3A7P24462 503 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ABL2P42684 1182 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PTDSS1P48651 473 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SNRPFP62306 86 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 LAMB3Q13751 1172 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 RASIP1Q5U651 963 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 RHBDF2Q6PJF5 856 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM42Q8IWZ5 723 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 C18orf8Q96DM3 657 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DYNLL2Q96FJ2 89 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 FAM163AQ96GL9 167 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TBC1D10AQ9BXI6 508 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ANO3Q9BYT9 981 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM55Q9BYV6 548 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DNAJC5Q9H3Z4 198 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DBR1Q9UK59 544 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ADGRA3Q8IWK6 1321 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 NWD2Q9ULI1 1742 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ADAMTS3O15072 1205 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 LRP5O75197 1615 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TJP3O95049 919 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CTTNQ14247 550 aaKnown RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 FAM91A1Q658Y4 838 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TMEM154Q6P9G4 183 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 CNBD1Q8NA66 436 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 THAP2Q9H0W7 228 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SYNCQ9H7C4 482 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 LNPEPQ9UIQ6 1025 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZFP69BQ9UJL9 534 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 MYH15Q9Y2K3 1946 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 BCL9O00512 1426 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DPPA5A6NC42 116 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PDLIM1O00151 329 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ASMTLO95671 621 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 LONRF1Q17RB8 773 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 HSP90AA5PQ58FG0 334 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 SMYD5Q6GMV2 418 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 FAM47EQ6ZV65 393 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF804AQ7Z570 1209 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 NME8Q8N427 588 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PRCCQ92733 491 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF212Q9UDV6 495 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 FETUBQ9UGM5 382 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 TMCO1Q9UM00 188 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 PHTF1Q9UMS5 762 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 NAALADL1Q9UQQ1 740 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 DUOX1Q9NRD9 1551 aa5.1□□□□□ -1.59
PTPN13-201ENST00000316707 EXOC1LA0A1B0GW35 172 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 POTEB3A0JP26 581 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 RAD21O60216 631 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 FTLP02792 175 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 IRX4P78413 519 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF568Q3ZCX4 644 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 DAB2IPQ5VWQ8 1189 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 USP17L2Q6R6M4 530 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 POTEBQ6S5H4 581 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 C4orf50Q6ZRC1 276 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 NLRP9Q7RTR0 991 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ANKS1BQ7Z6G8 1248 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TRABD2AQ86V40 505 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 LONP2Q86WA8 852 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC125Q86Z20 511 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 SLC17A8Q8NDX2 589 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 GLIS3Q8NEA6 775 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 GJA10Q969M2 543 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC17Q96LX7 622 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PPP1R12CQ9BZL4 782 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MYLK2Q9H1R3 596 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TMOD4Q9NZQ9 345 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 WDR35Q9P2L0 1181 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 SSX2IPQ9Y2D8 614 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MTO1Q9Y2Z2 717 aaKnown RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 RABGAP1Q9Y3P9 1069 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PLIN4Q96Q06 1357 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 XIAPP98170 497 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PTP4A2Q12974 167 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MESDQ14696 234 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ARHGAP22Q7Z5H3 698 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 STKLD1Q8NE28 680 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF333Q96JL9 665 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TMEM206Q9H813 350 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 SMIM31A0A1B0GVY4 71 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 CIB2O75838 187 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MYBL1P10243 752 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 BPIFB4P59827 614 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ARHGAP4P98171 946 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MYL7Q01449 175 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF543Q08ER8 600 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PABPC4Q13310 644 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 CCNG2Q16589 344 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TTC27Q6P3X3 843 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 B4GALNT2Q8NHY0 566 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 GFM2Q969S9 779 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms