RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 RBP5P82980 135 aa9.62□□□□□ -0.87
CTC1-201ENST00000315684 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
CTC1-201ENST00000315684 TCEA2Q15560 299 aa9.62□□□□□ -0.87
CTC1-201ENST00000315684 HABP4Q5JVS0 413 aaKnown RBP9.62□□□□□ -0.87
CTC1-201ENST00000315684 SMAP1Q8IYB5 467 aaPredicted RBP9.62□□□□□ -0.87
CTC1-201ENST00000315684 STKLD1Q8NE28 680 aa9.62□□□□□ -0.87
CTC1-201ENST00000315684 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
CTC1-201ENST00000315684 IFT122Q9HBG6 1241 aa9.62□□□□□ -0.87
CTC1-201ENST00000315684 SCAMP3O14828 347 aaKnown RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 PPP1R12AO14974 1030 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 TLL1O43897 1013 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 ALDH2P05091 517 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 INSRRP14616 1297 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CCDC144BQ3MJ40 725 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CTXN3Q4LDR2 81 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 INTS2Q9H0H0 1204 aaKnown RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 ROBO1Q9Y6N7 1651 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 TCP11X2Q5H9J9 407 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 SLC30A5Q8TAD4 765 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CKMP06732 381 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 MBL2P11226 248 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 INHBEP58166 350 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 MRPS25P82663 173 aaKnown RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 GRK7Q8WTQ7 553 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 SH3KBP1Q96B97 665 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 LENG1Q96BZ8 264 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 GOLPH3LQ9H4A5 285 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CNOT8Q9UFF9 292 aaKnown RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 ADAMTS1Q9UHI8 967 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 EPN1Q9Y6I3 576 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 MSH4O15457 936 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CDC42EP1Q00587 391 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 NECAB2Q7Z6G3 386 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 GIPC2Q8TF65 315 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 SNTG2Q9NY99 539 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 PLS3P13797 630 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 PSEN2P49810 448 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 IRX4P78413 519 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
CTC1-201ENST00000315684 SLC38A7Q9NVC3 462 aa9.61□□□□□ -0.87
CTC1-201ENST00000315684 CYP26A1O43174 497 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SDC4P31431 198 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 NCOA4Q13772 614 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 MIB1Q86YT6 1006 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 TMEM35BQ8NCS4 154 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 CPA5Q8WXQ8 436 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 NRBP1Q9UHY1 535 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 IVLP07476 585 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 GRK4P32298 578 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 RAP1GAPP47736 663 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 IKBKEQ14164 716 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SV2CQ496J9 727 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 AP1M1Q9BXS5 423 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 STK36Q9NRP7 1315 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 GNL1P36915 607 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 ANKRD40Q6AI12 368 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 TMEM60Q9H2L4 133 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 SERPIND1P05546 499 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 ARL4DP49703 201 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ANTXR2P58335 489 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 TDRD10Q5VZ19 366 aaKnown RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 SYTL5Q8TDW5 730 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 NHEJ1Q9H9Q4 299 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 DPP3Q9NY33 737 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ANAPC4Q9UJX5 808 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 A0A1W2PQ27 194 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 A0A1W2PQ64 194 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 A0A1W2PQD8 194 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ARHGAP6O43182 974 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 RFC5P40937 340 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 CDK17Q00537 523 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 TIGD1Q96MW7 591 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ABHD16BQ9H3Z7 469 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 SAR1BQ9Y6B6 198 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 LRRC63Q05C16 580 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ZNF235Q14590 738 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 DRAP1Q14919 205 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 CATSPER3Q86XQ3 398 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 ARHGEF28Q8N1W1 1705 aaKnown RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 SLC7A14Q8TBB6 771 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 FAF2Q96CS3 445 aa9.6□□□□□ -0.87
CTC1-201ENST00000315684 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 TYW1Q9NV66 732 aaKnown RBP9.6□□□□□ -0.87
CTC1-201ENST00000315684 NDFIP2Q9NV92 336 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms