RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 NR1I2O75469 434 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 GAP43P17677 238 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 FAM189BP81408 668 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 SMAD3P84022 425 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 AMPD3Q01432 767 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 STRN3Q13033 797 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 PNOCQ13519 176 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 SNW1Q13573 536 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 ATF7IP2Q5U623 682 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 NOTUMQ6P988 496 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 Q7L0L9 218 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 NPAS4Q8IUM7 802 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 CCDC65Q8IXS2 484 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 ENGASEQ8NFI3 743 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 BICD1Q96G01 975 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 YME1L1Q96TA2 773 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 PYM1Q9BRP8 204 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 NXF3Q9H4D5 531 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 TMEM134Q9H6X4 195 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
CDC42-201ENST00000315554 C17orf75Q9HAS0 396 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 MAGEF1Q9HAY2 307 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 CHST12Q9NRB3 414 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 DACT1Q9NYF0 836 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 MSRAQ9UJ68 235 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 MTUS1Q9ULD2 1270 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 PCDHB2Q9Y5E7 798 aa8.64□□□□□ -1.03
CDC42-201ENST00000315554 CNTNAP2Q9UHC6 1331 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 A0A0U1RQF3 1178 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 FRMD3A2A2Y4 597 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 KLRC4O43908 158 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 DGKIO75912 1065 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 PRPF6O94906 941 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 GCNT3O95395 438 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 STAG3L1P0CL83 205 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 AKAP5P24588 427 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 AXLP30530 894 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 MATR3P43243 847 aaKnown RBP eCLIP8.63□□□□□ -1.036e-7■■■■□ 22.3
CDC42-201ENST00000315554 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDC42-201ENST00000315554 OSTNP61366 133 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 KCNA1Q09470 495 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 RAB30Q15771 203 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 FAM187BQ17R55 369 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 SEZ6Q53EL9 994 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 CLLU1OSQ5K130 101 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 SLC27A1Q6PCB7 646 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 UNC13DQ70J99 1090 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 ZNF598Q86UK7 904 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 CRIPAKQ8N1N5 446 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 TIFAQ96CG3 184 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 PRIMPOLQ96LW4 560 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 RAD9AQ99638 391 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 ACO2Q99798 780 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 NTPCRQ9BSD7 190 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 TRIM6Q9C030 488 aaPredicted RBP8.63□□□□□ -1.03
CDC42-201ENST00000315554 SLC39A2Q9NP94 309 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 TMEM161AQ9NX61 479 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 KLK14Q9P0G3 267 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 ANKFY1Q9P2R3 1169 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 USP25Q9UHP3 1055 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 TBX20Q9UMR3 447 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 INPP5FQ9Y2H2 1132 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 IPPQ9Y573 584 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 PCDHA11Q9Y5I1 949 aa8.63□□□□□ -1.03
CDC42-201ENST00000315554 COL4A6Q14031 1691 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 A0A1B0GUA9 196 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 ANKRD63C9JTQ0 380 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 RFXAPO00287 272 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 N4BP3O15049 544 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 ITGA4P13612 1032 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 LIG4P49917 911 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 RAB27AP51159 221 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
CDC42-201ENST00000315554 UBE2HP62256 183 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 HTRA4P83105 476 aaPredicted RBP8.62□□□□□ -1.03
CDC42-201ENST00000315554 BTG3Q14201 252 aaPredicted RBP8.62□□□□□ -1.03
CDC42-201ENST00000315554 PCBP1Q15365 356 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42-201ENST00000315554 ZNF568Q3ZCX4 644 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 FAM26FQ5R3K3 315 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 AGMOQ6ZNB7 445 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 ZNF720Q7Z2F6 126 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 NELFCDQ8IXH7 590 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 THNSL1Q8IYQ7 743 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 CEP120Q8N960 986 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 ZNF689Q96CS4 500 aaPredicted RBP8.62□□□□□ -1.03
CDC42-201ENST00000315554 C17orf80Q9BSJ5 609 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 TCHPQ9BT92 498 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 CDT1Q9H211 546 aa8.62□□□□□ -1.03
CDC42-201ENST00000315554 CXCL16Q9H2A7 254 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms