RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 PAGR1Q9BTK6 254 aa20.58■□□□□ 0.89
CD55-201ENST00000314754 THAP2Q9H0W7 228 aa20.58■□□□□ 0.89
CD55-201ENST00000314754 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
CD55-201ENST00000314754 RAB20Q9NX57 234 aa20.58■□□□□ 0.89
CD55-201ENST00000314754 SPDYE5A6NIY4 337 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 ZNF233A6NK53 670 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 USP8P40818 1118 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.88
CD55-201ENST00000314754 STRN3Q13033 797 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 SV2AQ7L0J3 742 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 HELQQ8TDG4 1101 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 TAS1R2Q8TE23 839 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 CEP89Q96ST8 783 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 FAM213AQ9BRX8 229 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 ISCUQ9H1K1 167 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 HPCAL4Q9UM19 191 aa20.58■□□□□ 0.88
CD55-201ENST00000314754 A0A0U1RQG5 324 aaPredicted RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 GSTTP1A0A1W2PQM5 241 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 KIAA0391O15091 583 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 EXTL3O43909 919 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 DLATP10515 647 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 NF2P35240 595 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 TNNC1P63316 161 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 RHOT2Q8IXI1 618 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 ARHGEF26Q96DR7 871 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 GDAP1L1Q96MZ0 367 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 MED4Q9NPJ6 270 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 NOCTQ9UK39 431 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 AMFRQ9UKV5 643 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 AGTPBP1Q9UPW5 1226 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 CEP104O60308 925 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 SLC25A27O95847 323 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 GLRA2P23416 452 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 ARL2P36404 184 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 RFC5P40937 340 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 AARSP49588 968 aaKnown RBP eCLIP20.57■□□□□ 0.884e-6■■■■□ 24
CD55-201ENST00000314754 HADHBP55084 474 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 PRPF4BQ13523 1007 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 HSP90B2PQ58FF3 399 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 CALR3Q96L12 384 aaKnown RBP20.57■□□□□ 0.88
CD55-201ENST00000314754 PCYT2Q99447 389 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
CD55-201ENST00000314754 PGRMC1O00264 195 aaKnown RBP20.56■□□□□ 0.88
CD55-201ENST00000314754 CNMDO75829 334 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 SGPL1O95470 568 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 PIGRP01833 764 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 FTLP02792 175 aaPredicted RBP20.56■□□□□ 0.88
CD55-201ENST00000314754 EPHB4P54760 987 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 METTL7BQ6UX53 244 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.88
CD55-201ENST00000314754 DEPTORQ8TB45 409 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
CD55-201ENST00000314754 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
CD55-201ENST00000314754 CYP26A1O43174 497 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 GZMAP12544 262 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 CLDN10P78369 228 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 TCEAL1Q15170 157 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 TARBP2Q15633 366 aaKnown RBP20.55■□□□□ 0.88
CD55-201ENST00000314754 FAM160B1Q5W0V3 765 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 NOP9Q86U38 636 aaKnown RBP20.55■□□□□ 0.88
CD55-201ENST00000314754 IFT20Q8IY31 132 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 RASGEF1CQ8N431 466 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 CCDC102AQ96A19 550 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 KRT12Q99456 494 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 ACP6Q9NPH0 428 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 NRBP2Q9NSY0 501 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 LRRIQ4A6NIV6 560 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 ZC3H11AO75152 810 aaKnown RBP eCLIP20.55■□□□□ 0.882e-16■□□□□ 9.5
CD55-201ENST00000314754 RTN2O75298 545 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 COPB2P35606 906 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 STAT5BP51692 787 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 EMBQ6PCB8 327 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 EEPD1Q7L9B9 569 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 FAM71BQ8TC56 605 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 SCFD2Q8WU76 684 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 PSPC1Q8WXF1 523 aaKnown RBP20.55■□□□□ 0.88
CD55-201ENST00000314754 CDCA5Q96FF9 252 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 MPHOSPH6Q99547 160 aaKnown RBP20.55■□□□□ 0.88
CD55-201ENST00000314754 GDF3Q9NR23 364 aa20.55■□□□□ 0.88
CD55-201ENST00000314754 K7ERI5 159 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 HEXIM1O94992 359 aaKnown RBP20.54■□□□□ 0.88
CD55-201ENST00000314754 GLI1P08151 1106 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 CHRNB2P17787 502 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 PPIL2Q13356 520 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 PSMD6Q15008 389 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 SLFN12LQ6IEE8 588 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 C15orf39Q6ZRI6 1047 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 SLC47A2Q86VL8 602 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 SEPT1Q8WYJ6 367 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 NOC2LQ9Y3T9 749 aaKnown RBP20.54■□□□□ 0.88
CD55-201ENST00000314754 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
CD55-201ENST00000314754 GGPS1O95749 300 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 YBX3P16989 372 aaKnown RBP eCLIP20.54■□□□□ 0.881e-8■■□□□ 12.4
CD55-201ENST00000314754 GCNT1Q02742 428 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 FAM81BQ96LP2 452 aa20.54■□□□□ 0.88
CD55-201ENST00000314754 TXNRD2Q9NNW7 524 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms