RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 AXDND1Q5T1B0 1012 aaPredicted RBP20.2■□□□□ 0.82
RPA2-201ENST00000313433 PTCRAQ6ISU1 281 aaPredicted RBP20.2■□□□□ 0.82
RPA2-201ENST00000313433 COLGALT2Q8IYK4 626 aa20.2■□□□□ 0.82
RPA2-201ENST00000313433 URGCPQ8TCY9 931 aa20.2■□□□□ 0.82
RPA2-201ENST00000313433 NT5C3AQ9H0P0 336 aa20.2■□□□□ 0.82
RPA2-201ENST00000313433 ZBP1Q9H171 429 aa20.2■□□□□ 0.82
RPA2-201ENST00000313433 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
RPA2-201ENST00000313433 UBA7P41226 1012 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 ALDH7A1P49419 539 aaKnown RBP20.19■□□□□ 0.82
RPA2-201ENST00000313433 RNASELQ05823 741 aaKnown RBP20.19■□□□□ 0.82
RPA2-201ENST00000313433 MCM6Q14566 821 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 EP400NLQ6ZTU2 488 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 AUTS2Q8WXX7 1259 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 IFT74Q96LB3 600 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 ENTPD7Q9NQZ7 604 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 CACNG4Q9UBN1 327 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 BARX2Q9UMQ3 279 aaPredicted RBP20.19■□□□□ 0.82
RPA2-201ENST00000313433 GIT1Q9Y2X7 761 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 PDCD11Q14690 1871 aaKnown RBP20.19■□□□□ 0.82
RPA2-201ENST00000313433 PHLPP2Q6ZVD8 1323 aa20.19■□□□□ 0.82
RPA2-201ENST00000313433 PLXNA3P51805 1871 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 C2orf71A6NGG8 1288 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 ABLIM1O14639 778 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 PTGESO14684 152 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 NRP1O14786 923 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 N4BP3O15049 544 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 SPTLC2O15270 562 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 SLC26A4O43511 780 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 NCK2O43639 380 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPA2-201ENST00000313433 EFNA5P52803 228 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 NCBP1Q09161 790 aaKnown RBP20.18■□□□□ 0.82
RPA2-201ENST00000313433 STK38Q15208 465 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
RPA2-201ENST00000313433 KRI1Q8N9T8 703 aaKnown RBP20.18■□□□□ 0.82
RPA2-201ENST00000313433 MICAL1Q8TDZ2 1067 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 KHSRPQ92945 711 aaKnown RBP eCLIP20.18■□□□□ 0.824e-8■■■□□ 18.1
RPA2-201ENST00000313433 DRC1Q96MC2 740 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 TMEM175Q9BSA9 504 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 TRIM6Q9C030 488 aaPredicted RBP20.18■□□□□ 0.82
RPA2-201ENST00000313433 TLE6Q9H808 572 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 PTPRHQ9HD43 1115 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 UBN1Q9NPG3 1134 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 SNTG2Q9NY99 539 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 ZMYM2Q9UBW7 1377 aa20.18■□□□□ 0.82
RPA2-201ENST00000313433 CCDC169A6NNP5 214 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 TNFRSF10AO00220 468 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 SLC16A4O15374 487 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 YEATS4O95619 227 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 KRT17Q04695 432 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 NAB2Q15742 525 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 PDE12Q6L8Q7 609 aaKnown RBP20.17■□□□□ 0.82
RPA2-201ENST00000313433 RNF168Q8IYW5 571 aaPredicted RBP20.17■□□□□ 0.82
RPA2-201ENST00000313433 VPS52Q8N1B4 723 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 KCTD17Q8N5Z5 321 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 RAD54LQ92698 747 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 TMEM169Q96HH4 297 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 ZNF396Q96N95 335 aaPredicted RBP20.17■□□□□ 0.82
RPA2-201ENST00000313433 TMEM134Q9H6X4 195 aa20.17■□□□□ 0.82
RPA2-201ENST00000313433 MEFVO15553 781 aaPredicted RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 MBTPS2O43462 519 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 PPP6R2O75170 966 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 RECQL4O94761 1208 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 ATF7IP2Q5U623 682 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 TMC7Q7Z402 723 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 FAM178BQ8IXR5 827 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 CEP120Q8N960 986 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 MRPL43Q8N983 215 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 TMEM161BQ8NDZ6 487 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 CDK5RAP3Q96JB5 506 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 ACO2Q99798 780 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 REEP2Q9BRK0 252 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 PAAF1Q9BRP4 392 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 NTPCRQ9BSD7 190 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 TIPINQ9BVW5 301 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 NGRNQ9NPE2 291 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 KMT5AQ9NQR1 393 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 KANSL3Q9P2N6 904 aa20.16■□□□□ 0.82
RPA2-201ENST00000313433 PUF60Q9UHX1 559 aaKnown RBP20.16■□□□□ 0.82
RPA2-201ENST00000313433 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 CITO14578 2027 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 K7ERI5 159 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 CTSAP10619 480 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 PDIA4P13667 645 aaKnown RBP20.15■□□□□ 0.82
RPA2-201ENST00000313433 PLS3P13797 630 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 PROZP22891 400 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 NDUFV1P49821 464 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 DMP1Q13316 513 aaPredicted RBP20.15■□□□□ 0.82
RPA2-201ENST00000313433 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
RPA2-201ENST00000313433 TAS1R1Q7RTX1 841 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 GPBP1Q86WP2 473 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 FEZF2Q8TBJ5 459 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 SPIRE2Q8WWL2 714 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 RABGGTAQ92696 567 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 CALML4Q96GE6 196 aa20.15■□□□□ 0.82
RPA2-201ENST00000313433 TARS2Q9BW92 718 aaKnown RBP20.15■□□□□ 0.82
RPA2-201ENST00000313433 CDT1Q9H211 546 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms