RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FAM187BQ17R55 369 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 ERCC4Q92889 916 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 VN1R3Q9BXE9 311 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 CDT1Q9H211 546 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
SCFD1-201ENST00000311943 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
SCFD1-201ENST00000311943 TXLNAP40222 546 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 TNFSF9P41273 254 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 SLC11A1P49279 550 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 BCAR1P56945 870 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 PPP2R5AQ15172 486 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 NOMO2Q5JPE7 1267 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 SCARA3Q6AZY7 606 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
SCFD1-201ENST00000311943 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
SCFD1-201ENST00000311943 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 GOLGA2P5Q9HBQ8 144 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 STK17AQ9UEE5 414 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
SCFD1-201ENST00000311943 PTGESO14684 152 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 PER2O15055 1255 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-201ENST00000311943 FGF18O76093 207 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 RECQL4O94761 1208 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 TAS1R1Q7RTX1 841 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 HASPINQ8TF76 798 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 KBTBD4Q9NVX7 518 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 TRIP11Q15643 1979 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 C5orf67F2Z3F1 127 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 LINC01565O15544 149 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 ACTN4O43707 911 aaKnown RBP13.23□□□□□ -0.29
SCFD1-201ENST00000311943 ZNF568Q3ZCX4 644 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 GLB1LQ6UWU2 654 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 SPIRE2Q8WWL2 714 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 ZMAT2Q96NC0 199 aaKnown RBP13.23□□□□□ -0.29
SCFD1-201ENST00000311943 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 ODF2LQ9ULJ1 636 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 TBX20Q9UMR3 447 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
SCFD1-201ENST00000311943 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
SCFD1-201ENST00000311943 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
SCFD1-201ENST00000311943 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 GALTP07902 379 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 PROZP22891 400 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 AXLP30530 894 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 WNT7BP56706 349 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 ADALQ6DHV7 355 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 LRRC43Q8N309 656 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 TCHPQ9BT92 498 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 TNFSF13BQ9Y275 285 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 HOXD13P35453 343 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 RNASELQ05823 741 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 SOX4Q06945 474 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 SKIV2LQ15477 1246 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 FSIP1Q8NA03 581 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 MRPL4Q9BYD3 311 aaKnown RBP13.22□□□□□ -0.29
SCFD1-201ENST00000311943 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 KCND2Q9NZV8 630 aa13.22□□□□□ -0.29
SCFD1-201ENST00000311943 BRWD1Q9NSI6 2320 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
SCFD1-201ENST00000311943 NRP1O14786 923 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 RAB27AP51159 221 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 EFNA5P52803 228 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.29
SCFD1-201ENST00000311943 COASYQ13057 564 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 NAB2Q15742 525 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 ATL3Q6DD88 541 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 SLC39A11Q8N1S5 342 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 MRPL44Q9H9J2 332 aaKnown RBP13.21□□□□□ -0.29
SCFD1-201ENST00000311943 MARCH5Q9NX47 278 aa13.21□□□□□ -0.29
SCFD1-201ENST00000311943 N4BP3O15049 544 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 PPP1R37O75864 691 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 CMA1P23946 247 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 ADSSP30520 456 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 OR1G1P47890 313 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms