RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TRIM67Q6ZTA4 783 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 SRRM1Q8IYB3 904 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 SLC26A7Q8TE54 656 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 PGBD1Q96JS3 809 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 DACH2Q96NX9 599 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 RNF26Q9BY78 433 aaPredicted RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 GOLGA8CPA6NN73 597 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 M0R2C6 588 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 TXNP10599 105 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 KRT4P19013 534 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 TMED10P49755 219 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 PMS2P54278 862 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 PROM2Q8N271 834 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 TEX9Q8N6V9 391 aa8.71□□□□□ -1.02
VPS41-202ENST00000310301 LARP4BQ92615 738 aaKnown RBP8.71□□□□□ -1.02
VPS41-202ENST00000310301 PODXLO00592 558 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 DYNC1LI2O43237 492 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 CEP55Q53EZ4 464 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 SAMD3Q8N6K7 520 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS41-202ENST00000310301 ANO3Q9BYT9 981 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 EHD2Q9NZN4 543 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 HESX1Q9UBX0 185 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 KIAA1024Q9UPX6 916 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 ADCY3O60266 1144 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 KRT76Q01546 638 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 TSTA3Q13630 321 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 LRRC14Q15048 493 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 METTL23Q86XA0 190 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 WNK4Q96J92 1243 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 GCNAQ96QF7 691 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 ASCC2Q9H1I8 757 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 OSBPL3Q9H4L5 887 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 DISC1Q9NRI5 854 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 GCNT4Q9P109 453 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 E2F6O75461 281 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 AKR1B1P15121 316 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 XRRA1Q6P2D8 792 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 KCTD6Q8NC69 237 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 CEP95Q96GE4 821 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 PIGSQ96S52 555 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 MID2Q9UJV3 735 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 NFAT5O94916 1531 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 NKRFO15226 690 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS41-202ENST00000310301 APOA1P02647 267 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 THOC5Q13769 683 aaKnown RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 TEDDM1Q5T9Z0 273 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 CCNYQ8ND76 341 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 RMDN2Q96LZ7 410 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 RAG1P15918 1043 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 PSMD7P51665 324 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 IFRD2Q12894 506 aaPredicted RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 CCDC144BQ3MJ40 725 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 RASSF3Q86WH2 238 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 ZNF473Q8WTR7 871 aaKnown RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 PAWRQ96IZ0 340 aaKnown RBP8.7□□□□□ -1.02
VPS41-202ENST00000310301 SPATA33Q96N06 139 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 TMEM47Q9BQJ4 181 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 TEKT2Q9UIF3 430 aa8.7□□□□□ -1.02
VPS41-202ENST00000310301 CCDC195A0A1B0GUA6 201 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 KRT8P05787 483 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 DDIT3P35638 169 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 LIFRP42702 1097 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 ARFIP2P53365 341 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 KLC1Q07866 573 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 CYTH1Q15438 398 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 TRIM60Q495X7 471 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 ENAHQ8N8S7 591 aaPredicted RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 UBE2TQ9NPD8 197 aaPredicted RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 GGT7Q9UJ14 662 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 CLIC2O15247 247 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 KCNA3P22001 575 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 RESTQ13127 1097 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 DMP1Q13316 513 aaPredicted RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 NCLNQ969V3 563 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 PAGE5Q96GU1 130 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 EPN3Q9H201 632 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 ABHD10Q9NUJ1 306 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 L3MBTL1Q9Y468 752 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 ESYT3A0FGR9 886 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 GOLGA8SH3BPF8 625 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 CABYRO75952 493 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 TMEM191BP0C7N4 346 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 CYP2D6P10635 497 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 TNFAIP2Q03169 654 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 YWHAHQ04917 246 aaPredicted RBP8.69□□□□□ -1.02
VPS41-202ENST00000310301 IDI2Q9BXS1 227 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 CYP4F11Q9HBI6 524 aa8.69□□□□□ -1.02
VPS41-202ENST00000310301 STARD7Q9NQZ5 370 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms