RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 PPP1R13BQ96KQ4 1090 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF560Q96MR9 790 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 DNAJC7Q99615 494 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 NIFKQ9BYG3 293 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 UTP6Q9NYH9 597 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 RGL1Q9NZL6 768 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 VPS18Q9P253 973 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 AGO2Q9UKV8 859 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 STRIP2Q9ULQ0 834 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 A0A087WUV0 522 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 EFCAB8A8MWE9 144 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 INO80B-WBP1J3KQ70 363 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 FOXN1O15353 648 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 DTNBO60941 627 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GJA8P48165 433 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GPC3P51654 580 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF131P52739 623 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 FMR1Q06787 632 aaKnown RBP eCLIP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PPFIA1Q13136 1202 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 CEP85LQ5SZL2 805 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 CELF3Q5SZQ8 465 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SPRYD7Q5W111 196 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 CC2D1AQ6P1N0 951 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 OLFML1Q6UWY5 402 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SIAH1Q8IUQ4 282 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 BEST2Q8NFU1 509 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 NLRP7Q8WX94 980 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GLIS2Q9BZE0 524 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 STMN4Q9H169 189 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 NHEJ1Q9H9Q4 299 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 WDR70Q9NW82 654 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 HSPBP1Q9NZL4 362 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SUCLA2Q9P2R7 463 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 KIAA1257Q9ULG3 409 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SAR1BQ9Y6B6 198 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 EMSYQ7Z589 1322 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 LTBP1Q14766 1721 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 RBM47A0AV96 593 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PMM2O15305 246 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 KLRC4O43908 158 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PRKCBP05771 671 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 RPSAP08865 295 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ATP1A3P13637 1013 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PNPLA4P41247 253 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ADKP55263 362 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GTF2BQ00403 316 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 DUOXA2Q1HG44 320 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 NANOGNBQ7Z5D8 188 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SRLQ86TD4 932 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 MAP4K3Q8IVH8 894 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 INTS2Q9H0H0 1204 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 ARFGAP3Q9NP61 516 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 AGPAT3Q9NRZ7 376 aa6.44□□□□□ -1.38
SEC22A-201ENST00000309934 PUF60Q9UHX1 559 aaKnown RBP6.44□□□□□ -1.38
SEC22A-201ENST00000309934 SLC16A4O15374 487 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 CD4P01730 458 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 ATICP31939 592 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 TCF7P36402 384 aaPredicted RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 PSMC4P43686 418 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 FMO5P49326 533 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 LMNB2Q03252 620 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 ADCY2Q08462 1091 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 LAMB3Q13751 1172 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 GLE1Q53GS7 698 aaKnown RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 LDLRAD1Q5T700 205 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 TAF2Q6P1X5 1199 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 RASGRP2Q7LDG7 609 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 GPR161Q8N6U8 529 aaKnown RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 BBOF1Q8ND07 529 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 GRK7Q8WTQ7 553 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 PGBD4Q96DM1 585 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 APBA2Q99767 749 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 SLC38A7Q9NVC3 462 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 HESX1Q9UBX0 185 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 PCDHAC2Q9Y5I4 1007 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 GRID2IPA4D2P6 1211 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 CALB1P05937 261 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 CLTAP09496 248 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 SOX5P35711 763 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 NSFP46459 744 aaKnown RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 NCKAP1LP55160 1127 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 ZBTB17Q13105 803 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 BRD3Q15059 726 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 HADHQ16836 314 aaKnown RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 MUM1L1Q5H9M0 696 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 TRIM59Q8IWR1 403 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 GBP7Q8N8V2 638 aaPredicted RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.43□□□□□ -1.381e-6■■■■■ 56.2
SEC22A-201ENST00000309934 DNAJC19Q96DA6 116 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 RPS6KC1Q96S38 1066 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 APEX2Q9UBZ4 518 aa6.43□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 TPX2Q9ULW0 747 aaKnown RBP6.43□□□□□ -1.38
SEC22A-201ENST00000309934 RARBP10826 455 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms