RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MAML3Q96JK9 1138 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 SYT11Q9BT88 431 aa23.02■■□□□ 1.28
ATG4D-201ENST00000309469 MCM3APO60318 1980 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 A0A0B4J269 797 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 LDHAP00338 332 aaKnown RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 SRGAP2CP0DJJ0 459 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 ADCYAP1R1P41586 468 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 NLRP11P59045 1033 aaKnown RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 CDCA2Q69YH5 1023 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 OLIG1Q8TAK6 271 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 LNX1Q8TBB1 728 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 TAS1R2Q8TE23 839 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 TRAPPC12Q8WVT3 735 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 EMID1Q96A84 441 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 RNPEPQ9H4A4 650 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 RAB20Q9NX57 234 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 SUCLA2Q9P2R7 463 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-201ENST00000309469 ATP8B3O60423 1300 aa23.01■■□□□ 1.27
ATG4D-201ENST00000309469 SRGAP2O75044 1071 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 ACOT2P49753 483 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CLDN10P78369 228 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CRELD2Q6UXH1 353 aaPredicted RBP23■■□□□ 1.27
ATG4D-201ENST00000309469 ZPBP2Q6X784 338 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 PPTC7Q8NI37 304 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 RABGGTAQ92696 567 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 MSTO1Q9BUK6 570 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CCDC113Q9H0I3 377 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 ANKFY1Q9P2R3 1169 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CTAGE15A4D2H0 777 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 LGALS2P05162 132 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CTAGE8P0CG41 777 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.27
ATG4D-201ENST00000309469 CTAGE6Q86UF2 777 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 ZBTB8OSQ8IWT0 167 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 CTAGE4Q8IX94 777 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 RNF149Q8NC42 400 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 U2AF1L4Q8WU68 220 aaKnown RBP23■■□□□ 1.27
ATG4D-201ENST00000309469 KAT5Q92993 513 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 SNX12Q9UMY4 172 aa23■■□□□ 1.27
ATG4D-201ENST00000309469 MSCO60682 206 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 TUBB4BP68371 445 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 FBXO38Q6PIJ6 1188 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 C15orf39Q6ZRI6 1047 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 GLYCTKQ8IVS8 523 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 GPR161Q8N6U8 529 aaKnown RBP22.99■■□□□ 1.27
ATG4D-201ENST00000309469 AFG1LQ8WV93 481 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 ZNF516Q92618 1163 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 FNBP1Q96RU3 617 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 MRPL4Q9BYD3 311 aaKnown RBP22.99■■□□□ 1.27
ATG4D-201ENST00000309469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.99■■□□□ 1.271e-7■■■■■ 271.5
ATG4D-201ENST00000309469 INTUQ9ULD6 942 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 ADGRA2Q96PE1 1338 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 SIP14410 1827 aa22.99■■□□□ 1.27
ATG4D-201ENST00000309469 SLC15A5A6NIM6 579 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 H2AFZP0C0S5 128 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 PRLRP16471 622 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 MFAP3P55082 362 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 ZNF484Q5JVG2 852 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 EFCAB12Q6NXP0 572 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 H2AFVQ71UI9 128 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 RHPN2Q8IUC4 686 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 PPM1KQ8N3J5 372 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 KREMEN1Q96MU8 473 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 NT5C1BQ96P26 610 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 TINF2Q9BSI4 451 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 C2orf40Q9H1Z8 148 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 PLXNA1Q9UIW2 1896 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-201ENST00000309469 TNFAIP3P21580 790 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 CHADLQ6NUI6 762 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 HELQQ8TDG4 1101 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 RBAKQ9NYW8 714 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-201ENST00000309469 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 PCDHGC5Q9Y5F6 944 aa22.98■■□□□ 1.27
ATG4D-201ENST00000309469 TTLL13PA6NNM8 815 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 CLDN3O15551 220 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 PALMO75781 387 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 INSRRP14616 1297 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 H2AFXP16104 143 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-201ENST00000309469 ZNF157P51786 506 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-201ENST00000309469 PRPF4BQ13523 1007 aaKnown RBP22.97■■□□□ 1.27
ATG4D-201ENST00000309469 TFDP1Q14186 410 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 MAPK6Q16659 721 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 ZBTB41Q5SVQ8 909 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 DNAAF5Q86Y56 855 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 RASAL3Q86YV0 1011 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 FAM71AQ8IYT1 594 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 NPLOC4Q8TAT6 608 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 AGPAT1Q99943 283 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 CCDC94Q9BW85 323 aaPredicted RBP22.97■■□□□ 1.27
ATG4D-201ENST00000309469 EPC1Q9H2F5 836 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 ABHD16BQ9H3Z7 469 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 PDE11AQ9HCR9 933 aa22.97■■□□□ 1.27
ATG4D-201ENST00000309469 PPFIA4O75335 1185 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 C22orf31O95567 290 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 PRKCBP05771 671 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 TNNI1P19237 187 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 WNT7BP56706 349 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
ATG4D-201ENST00000309469 METTL13Q8N6R0 699 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms