RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PON1P27169 355 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 IL9RQ01113 521 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 GEN1Q17RS7 908 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 BBS9Q3SYG4 887 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 NOA1Q8NC60 698 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC30A5Q8TAD4 765 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 CDKL2Q92772 493 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 IP6K2Q9UHH9 426 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 BCL9LQ86UU0 1499 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 EXOC1LA0A1B0GW35 172 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 ATP11AP98196 1134 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 ADCY2Q08462 1091 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 NCOA4Q13772 614 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 WDR72Q3MJ13 1102 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 PCNX4Q63HM2 1172 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 DSTYKQ6XUX3 929 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 LRRC8CQ8TDW0 803 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 HAUS2Q9NVX0 235 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 UVRAGQ9P2Y5 699 aa12.19□□□□□ -0.46
PCDHGC3-201ENST00000308177 PARP4Q9UKK3 1724 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 M0QYV0 167 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 AKAP3O75969 853 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 MRPS9P82933 396 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CDK17Q00537 523 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TMED2Q15363 201 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CCDC137Q6PK04 289 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TARS2Q9BW92 718 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 ASNSD1Q9NWL6 643 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 ZBED1O96006 694 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLURP2P0DP57 97 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TFDP2Q14188 446 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 PPP6R3Q5H9R7 873 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 NAGPAQ9UK23 515 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 OATP04181 439 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 MSH2P43246 934 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CENPUQ71F23 418 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TTC13Q8NBP0 860 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 STMN2Q93045 179 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 MCUR1Q96AQ8 359 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CYP26B1Q9NR63 512 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 ARHGEF37A1IGU5 675 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 HUS1O60921 280 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 HLA-DRAP01903 254 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 TBX2Q13207 712 aaPredicted RBP12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 ARHGEF18Q6ZSZ5 1173 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 SMARCAL1Q9NZC9 954 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 PCSK1NQ9UHG2 260 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 DUSP10Q9Y6W6 482 aa12.18□□□□□ -0.46
PCDHGC3-201ENST00000308177 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 OTOP1Q7RTM1 612 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 LRRC10BA6NIK2 292 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 CPP00450 1065 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 LIG3P49916 1009 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 IFT88Q13099 833 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 RILPQ96NA2 401 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 CBWD1Q9BRT8 395 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 EXTL3O43909 919 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 SUN1O94901 812 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 KRT7P08729 469 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 VIL1P09327 827 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 IER5Q5VY09 327 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 LRRC71Q8N4P6 559 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 PYROXD1Q8WU10 500 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 RUBCNQ92622 972 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 AGO4Q9HCK5 861 aaKnown RBP12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 ARHGAP20Q9P2F6 1191 aa12.17□□□□□ -0.46
PCDHGC3-201ENST00000308177 MAGEB2O15479 319 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 CIB2O75838 187 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLITRK3O94933 977 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 CPA5Q8WXQ8 436 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms