RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ATP1A1P05023 1023 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 GNA15P30679 374 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 LSP1P33241 339 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 COPB2P35606 906 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 RASGRF1Q13972 1273 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 PDIA5Q14554 519 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ARHGEF6Q15052 776 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 EFHC2Q5JST6 749 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 PLD3Q8IV08 490 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 WDR24Q96S15 920 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 INTS2Q9H0H0 1204 aaKnown RBP8.08□□□□□ -1.12
SF3B3-201ENST00000302516 TUFT1Q9NNX1 390 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 ABCF3Q9NUQ8 709 aa8.08□□□□□ -1.12
SF3B3-201ENST00000302516 LARGE1O95461 756 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 RBBP7Q16576 425 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 LRRC8EQ6NSJ5 796 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 RWDD4Q6NW29 188 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TMEM270Q6UE05 265 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 ADCK1Q86TW2 530 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 KIAA2013Q8IYS2 634 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 APBB2Q92870 758 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 AP4S1Q9Y587 144 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PDXKO00764 312 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 GPC3P51654 580 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 DRAP1Q14919 205 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SLC18A3Q16572 532 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 DNAJC9Q8WXX5 260 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 FRMD8P1Q9BZ68 369 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TTC26A0AVF1 554 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 E5RI56 91 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PYGMP11217 842 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 MRPS15P82914 257 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 DDI1Q8WTU0 396 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CEP95Q96GE4 821 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 STRBPQ96SI9 672 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CRYMQ14894 314 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SUPT20HL1Q3ZLR7 823 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PCYOX1LQ8NBM8 494 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PPHLN1Q8NEY8 458 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PARD3BQ8TEW8 1205 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 STK33Q9BYT3 514 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TCP10L2B9ZVM9 353 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CHN1P15882 459 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CENPCQ03188 943 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SFR1Q86XK3 245 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SLC26A7Q8TE54 656 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CNPY3Q9BT09 278 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CXorf56Q9H5V9 222 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 ADGRA3Q8IWK6 1321 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 MTMR1Q13613 665 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PADI6Q6TGC4 694 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TRIM69Q86WT6 500 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 HIPK4Q8NE63 616 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CYFIP2Q96F07 1278 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 HDAC6Q9UBN7 1215 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 FBXO40Q9UH90 709 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CLDN3O15551 220 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 KITP10721 976 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CDC27P30260 824 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 MCAMP43121 646 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 ARSEP51690 589 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CLEC4GQ6UXB4 293 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SEC16BQ96JE7 1060 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 TRIM54Q9BYV2 358 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CDYLQ9Y232 598 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CCT8L1PA6NM43 557 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 PTPN12Q05209 780 aaKnown RBP8.07□□□□□ -1.12
SF3B3-201ENST00000302516 CCDC144BQ3MJ40 725 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 SULF1Q8IWU6 871 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 KCNV2Q8TDN2 545 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 DIABLOQ9NR28 239 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 WDR35Q9P2L0 1181 aa8.07□□□□□ -1.12
SF3B3-201ENST00000302516 ANKRD26Q9UPS8 1709 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 GYS2P54840 703 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ACTN3Q08043 901 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 NCAPHQ15003 741 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 RCSD1Q6JBY9 416 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SCARA5Q6ZMJ2 495 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 LONP2Q86WA8 852 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 BEST2Q8NFU1 509 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 O00370 1275 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 FTLP02792 175 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 GNAT1P11488 350 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 STILQ15468 1287 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 ZBTB41Q5SVQ8 909 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 HORMAD1Q86X24 394 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 FOXP4Q8IVH2 680 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-201ENST00000302516 SIRT2Q8IXJ6 389 aa8.06□□□□□ -1.12
SF3B3-201ENST00000302516 GSPT2Q8IYD1 628 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms