RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ACVR2BQ13705 512 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 TFDP1Q14186 410 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 PSMD6Q15008 389 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 SLC18A3Q16572 532 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 KRT39Q6A163 491 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 SLC35F6Q8N357 371 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
TPM3-202ENST00000302206 NAPGQ99747 312 aaPredicted RBP13.02□□□□□ -0.33
TPM3-202ENST00000302206 CCDC113Q9H0I3 377 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 TMEM8AQ9HCN3 771 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 DNAJC12Q9UKB3 198 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
TPM3-202ENST00000302206 CEP290O15078 2479 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 A0A0B4J269 797 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 GOLGA8IPA6NC78 632 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 GOLGA8JA6NMD2 632 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 LRRIQ3A6PVS8 624 aaPredicted RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 F8VZ95 297 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 ABCB7O75027 752 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 MARK3P27448 753 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 ADCYAP1R1P41586 468 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 GPC3P51654 580 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 TRIM50Q86XT4 487 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 USP6NLQ92738 828 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 SAAL1Q96ER3 474 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 NFKBIZQ9BYH8 718 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 IRX2Q9BZI1 471 aaPredicted RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 CPA4Q9UI42 421 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 AJAP1Q9UKB5 411 aaPredicted RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 AGO2Q9UKV8 859 aaKnown RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
TPM3-202ENST00000302206 GUCA1BQ9UMX6 200 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
TPM3-202ENST00000302206 SZT2Q5T011 3432 aa13□□□□□ -0.33
TPM3-202ENST00000302206 ANO9A1A5B4 782 aa13□□□□□ -0.33
TPM3-202ENST00000302206 RCCD1A6NED2 376 aa13□□□□□ -0.33
TPM3-202ENST00000302206 BTNL10A8MVZ5 291 aa13□□□□□ -0.33
TPM3-202ENST00000302206 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
TPM3-202ENST00000302206 C22orf31O95567 290 aa13□□□□□ -0.33
TPM3-202ENST00000302206 ABL1P00519 1130 aa13□□□□□ -0.33
TPM3-202ENST00000302206 GCLMP48507 274 aa13□□□□□ -0.33
TPM3-202ENST00000302206 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
TPM3-202ENST00000302206 KIF22Q14807 665 aa13□□□□□ -0.33
TPM3-202ENST00000302206 DRAP1Q14919 205 aaPredicted RBP13□□□□□ -0.33
TPM3-202ENST00000302206 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
TPM3-202ENST00000302206 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
TPM3-202ENST00000302206 LINC01465Q8N7H1 131 aa13□□□□□ -0.33
TPM3-202ENST00000302206 AFG1LQ8WV93 481 aa13□□□□□ -0.33
TPM3-202ENST00000302206 SECISBP2LQ93073 1101 aaKnown RBP13□□□□□ -0.33
TPM3-202ENST00000302206 ARMC5Q96C12 935 aa13□□□□□ -0.33
TPM3-202ENST00000302206 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
TPM3-202ENST00000302206 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
TPM3-202ENST00000302206 INTUQ9ULD6 942 aa13□□□□□ -0.33
TPM3-202ENST00000302206 NENFQ9UMX5 172 aa13□□□□□ -0.33
TPM3-202ENST00000302206 A0A087X0T9 212 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 MSCO60682 206 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TACC1O75410 805 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TOM1L1O75674 476 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 FAM228BP0C875 321 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 SMPD1P17405 629 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TUBB4BP68371 445 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 PTK2Q05397 1052 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 DRP2Q13474 957 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
TPM3-202ENST00000302206 NAB2Q15742 525 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 MAPK6Q16659 721 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 PHLDB3Q6NSJ2 640 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 GJB7Q6PEY0 223 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 ZNF571Q7Z3V5 609 aaPredicted RBP12.99□□□□□ -0.33
TPM3-202ENST00000302206 FBXL13Q8NEE6 735 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TRIM58Q8NG06 486 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 FAM213AQ9BRX8 229 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 SYT11Q9BT88 431 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TARS2Q9BW92 718 aaKnown RBP12.99□□□□□ -0.33
TPM3-202ENST00000302206 GPR88Q9GZN0 384 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 FZD8Q9H461 694 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 TRIM10Q9UDY6 481 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms