RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ZNF236Q9UL36 1845 aa24.15■■□□□ 1.46
SMAD1-201ENST00000302085 ADCY6O43306 1168 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 ANXA13P27216 316 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 CLCN3P51790 818 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 IGBP1P78318 339 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 CLDN10P78369 228 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 PRAMEF19Q5SWL8 479 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 ZPBP2Q6X784 338 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 TXLNBQ8N3L3 684 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 METTL13Q8N6R0 699 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 OLIG1Q8TAK6 271 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 MSTO1Q9BUK6 570 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 FLRT1Q9NZU1 646 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 ANKFY1Q9P2R3 1169 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 NENFQ9UMX5 172 aa24.14■■□□□ 1.46
SMAD1-201ENST00000302085 DOCK3Q8IZD9 2030 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 FAM155AB1AL88 458 aaPredicted RBP24.14■■□□□ 1.45
SMAD1-201ENST00000302085 MOCS3O95396 460 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 AMPD2Q01433 879 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 TAS1R2Q8TE23 839 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 FAM84AQ96KN4 292 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 PACSIN1Q9BY11 444 aa24.14■■□□□ 1.45
SMAD1-201ENST00000302085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.14■■□□□ 1.452e-6■■■■■ 149.1
SMAD1-201ENST00000302085 DDX3XO00571 662 aaKnown RBP eCLIP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 HOXD8P13378 290 aaPredicted RBP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 KLRC1P26715 233 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 MATR3P43243 847 aaKnown RBP eCLIP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 GPC3P51654 580 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 TUBB2AQ13885 445 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 ZBTB8OSQ8IWT0 167 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 OR6J1Q8NGC5 347 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 KAT5Q92993 513 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 ZNF668Q96K58 619 aaPredicted RBP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 TUBB2BQ9BVA1 445 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 MRPL4Q9BYD3 311 aaKnown RBP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 LUC7LQ9NQ29 371 aaKnown RBP24.13■■□□□ 1.45
SMAD1-201ENST00000302085 NAGPAQ9UK23 515 aa24.13■■□□□ 1.45
SMAD1-201ENST00000302085 ENC1O14682 589 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 LDHAP00338 332 aaKnown RBP24.12■■□□□ 1.45
SMAD1-201ENST00000302085 ATP1A1P05023 1023 aaKnown RBP24.12■■□□□ 1.45
SMAD1-201ENST00000302085 INHBEP58166 350 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 NAB2Q15742 525 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 C15orf39Q6ZRI6 1047 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 FBXL13Q8NEE6 735 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 MNS1Q8NEH6 495 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 SLC30A5Q8TAD4 765 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 USP6NLQ92738 828 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 VTI1AQ96AJ9 217 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 ACO2Q99798 780 aaKnown RBP24.12■■□□□ 1.45
SMAD1-201ENST00000302085 SYT11Q9BT88 431 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 C2orf40Q9H1Z8 148 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 PDE11AQ9HCR9 933 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 CAPN6Q9Y6Q1 641 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 H3BRB1 525 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 ASAP2O43150 1006 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 PRKCBP05771 671 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 MMP3P08254 477 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 TFDP1Q14186 410 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 KIF22Q14807 665 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 MAPK6Q16659 721 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 C10orf76Q5T2E6 689 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 LINC01465Q8N7H1 131 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 TUT1Q9H6E5 874 aaKnown RBP24.12■■□□□ 1.45
SMAD1-201ENST00000302085 RAB20Q9NX57 234 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 HDAC6Q9UBN7 1215 aa24.12■■□□□ 1.45
SMAD1-201ENST00000302085 TADA3O75528 432 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 HOXC6P09630 235 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 RBM10P98175 930 aaKnown RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 TNFAIP2Q03169 654 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 KIAA0753Q2KHM9 967 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 ALKBH5Q6P6C2 394 aaKnown RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 FMNL3Q8IVF7 1028 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 LNX1Q8TBB1 728 aaPredicted RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 ANKRD7Q92527 254 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 NLRP4Q96MN2 994 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 KREMEN1Q96MU8 473 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 FZD8Q9H461 694 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 TLL2Q9Y6L7 1015 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 DCAF8L1A6NGE4 600 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 MAGEB2O15479 319 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 CLDN3O15551 220 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 TACC1O75410 805 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 PTENP60484 403 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 BMS1Q14692 1282 aaKnown RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 SEZ6Q53EL9 994 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 PAPD7Q5XG87 772 aaKnown RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 LMBRD2Q68DH5 695 aaPredicted RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 VPS36Q86VN1 386 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 RNF10Q8N5U6 811 aaKnown RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 HELQQ8TDG4 1101 aa24.11■■□□□ 1.45
SMAD1-201ENST00000302085 RBAKQ9NYW8 714 aaPredicted RBP24.11■■□□□ 1.45
SMAD1-201ENST00000302085 EVPLQ92817 2033 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 ABLIM1O14639 778 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 TOM1L1O75674 476 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 TFRCP02786 760 aaKnown RBP24.1■■□□□ 1.45
SMAD1-201ENST00000302085 CCDC172P0C7W6 258 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 HSP90AA2PQ14568 343 aaPredicted RBP24.1■■□□□ 1.45
SMAD1-201ENST00000302085 ERCC6LQ2NKX8 1250 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 TRAPPC11Q7Z392 1133 aa24.1■■□□□ 1.45
SMAD1-201ENST00000302085 ZBTB33Q86T24 672 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms