RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 BSNDQ8WZ55 320 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 ZSWIM1Q9BR11 485 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 PI4K2AQ9BTU6 479 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 RAB17Q9H0T7 212 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 RTN2O75298 545 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 CNGA1P29973 690 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 NPTX2P47972 431 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 KCNJ1P48048 391 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 FMO1Q01740 532 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 MTMR2Q13614 643 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 EMC10Q5UCC4 262 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 ANO5Q75V66 913 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 B4GALNT4Q76KP1 1039 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 FMNL3Q8IVF7 1028 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 NUP85Q9BW27 656 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 ZDHHC18Q9NUE0 388 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TBX20Q9UMR3 447 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TRPC6Q9Y210 931 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 MAPTP10636 758 aaKnown RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 DPEP1P16444 411 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 PSMC5P62195 406 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 ALCAMQ13740 583 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 C12orf56Q8IXR9 622 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 UBL4BQ8N7F7 174 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TATDN2Q93075 761 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TBC1D22BQ9NU19 505 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 SLC12A6Q9UHW9 1150 aa13.87□□□□□ -0.19
HIF3A-204ENST00000300862 DIS3Q9Y2L1 958 aaKnown RBP13.87□□□□□ -0.19
HIF3A-204ENST00000300862 TLDC2A0PJX2 215 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 A6NNZ2 444 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 WDR46O15213 610 aaKnown RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 SPOPO43791 374 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PEX5P50542 639 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 NCKAP1LP55160 1127 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 ARHGEF16Q5VV41 709 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 ZDHHC24Q6UX98 284 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 NIPA1Q7RTP0 329 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 OTUD6BQ8N6M0 293 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 MDM1Q8TC05 714 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PARD3BQ8TEW8 1205 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 ZNF653Q96CK0 615 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PAGR1Q9BTK6 254 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 ZNRF3Q9ULT6 936 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 P4HA2O15460 535 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 CAND2O75155 1236 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PPFIA2O75334 1257 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 CYP11B1P15538 503 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PTGIRP43119 386 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 RPL21P46778 160 aaKnown RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 BAATQ14032 418 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 C2CD6Q53TS8 623 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 FKBP1CQ5VVH2 108 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 LMBRD2Q68DH5 695 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 SLC39A4Q6P5W5 647 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
HIF3A-204ENST00000300862 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 CABS1Q96KC9 395 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 EPB41L4BQ9H329 900 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
HIF3A-204ENST00000300862 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 LYPLA2O95372 231 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 DMP1Q13316 513 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 BIRC3Q13489 604 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 POMGNT1Q8WZA1 660 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 SHC3Q92529 594 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 CEP170P1Q96L14 293 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 PSMD1Q99460 953 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 TXLNGYQ9BZA5 131 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 TRIM7Q9C029 511 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 RPAP3Q9H6T3 665 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 MYOZ2Q9NPC6 264 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 KMT5AQ9NQR1 393 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 ZNF862O60290 1169 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms