RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
ERCC1-202ENST00000300853 PFASO15067 1338 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 GH1P01241 217 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
ERCC1-202ENST00000300853 USP4Q13107 963 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 DCUN1D2Q6PH85 259 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 ADGRA1Q86SQ6 560 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 PYROXD1Q8WU10 500 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
ERCC1-202ENST00000300853 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 NR2E1Q9Y466 385 aa12.63□□□□□ -0.39
ERCC1-202ENST00000300853 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 TTC4O95801 387 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 LINGO3P0C6S8 592 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 KITP10721 976 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 LMNB2Q03252 620 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 SLC34A1Q06495 639 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 DAB2IPQ5VWQ8 1189 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 SUSD4Q5VX71 490 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 CENPUQ71F23 418 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ZBED8Q8IZ13 594 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 NMRK1Q9NWW6 199 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 C3P01024 1663 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 A0A0A6YYK5 440 aaPredicted RBP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 FOXO6A8MYZ6 492 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 H3BRJ5 948 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 SLC37A4O43826 429 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 KRT36O76013 467 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 NPEPPSP55786 919 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ANO7Q6IWH7 933 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 MIGA2Q7L4E1 593 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 MTBPQ96DY7 904 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ARHGEF3Q9NR81 526 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 GINM1Q9NU53 330 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 K7ENM7 598 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 DKC1O60832 514 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ETS2P15036 469 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 CREB1P16220 341 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 RNF43Q68DV7 783 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 NDNQ99608 321 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 ANKRD2Q9GZV1 360 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 PAIP2BQ9ULR5 123 aaKnown RBP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
ERCC1-202ENST00000300853 PCDHA1Q9Y5I3 950 aa12.62□□□□□ -0.39
ERCC1-202ENST00000300853 CASQ2O14958 399 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 NPTXRO95502 500 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 MYBP10242 640 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 TMPRSS15P98073 1019 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ECHDC2Q86YB7 292 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 RSAD2Q8WXG1 361 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 TRAPPC9Q96Q05 1148 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 TSSK1BQ9BXA7 367 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 IFT122Q9HBG6 1241 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 SLCO1B3Q9NPD5 702 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 SENP1Q9P0U3 644 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 PDXKO00764 312 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 MAGEA4P43358 317 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 GCLMP48507 274 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 CASP4P49662 377 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 DSG1Q02413 1049 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 LGSNQ5TDP6 509 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 TRIM74Q86UV6 250 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 TRIM73Q86UV7 250 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 INPP5DQ92835 1189 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 BTBD6Q96KE9 485 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ERVK-5Q9HDB9 667 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ABLIM1O14639 778 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 DNAJC6O75061 913 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 WFS1O76024 890 aa12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ORC2Q13416 577 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ASTE1Q2TB18 679 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-202ENST00000300853 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms