RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 USTQ9Y2C2 406 aa23.23■■□□□ 1.31
SMCO4-201ENST00000298966 A0A087X0B3 334 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 POTEMA6NI47 508 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 CXCL14O95715 111 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 AMPD3Q01432 767 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 KARSQ15046 597 aaKnown RBP23.22■■□□□ 1.31
SMCO4-201ENST00000298966 C12orf76Q8N812 135 aaPredicted RBP23.22■■□□□ 1.31
SMCO4-201ENST00000298966 TRIML1Q8N9V2 468 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 MMTAG2Q9BU76 263 aaKnown RBP23.22■■□□□ 1.31
SMCO4-201ENST00000298966 RBSNQ9H1K0 784 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 ANO10Q9NW15 660 aa23.22■■□□□ 1.31
SMCO4-201ENST00000298966 ATP4AP20648 1035 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 ALDH7A1P49419 539 aaKnown RBP23.21■■□□□ 1.31
SMCO4-201ENST00000298966 STX1AQ16623 288 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 CLLU1OSQ5K130 101 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 TMEM169Q96HH4 297 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 MAP7D2Q96T17 732 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 POLR3CQ9BUI4 534 aaPredicted RBP23.21■■□□□ 1.31
SMCO4-201ENST00000298966 MRPL9Q9BYD2 267 aaKnown RBP23.21■■□□□ 1.31
SMCO4-201ENST00000298966 CYP26B1Q9NR63 512 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 AKT3Q9Y243 479 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 VPS13AQ96RL7 3174 aa23.21■■□□□ 1.31
SMCO4-201ENST00000298966 EP300Q09472 2414 aaPredicted RBP23.2■■□□□ 1.3
SMCO4-201ENST00000298966 PP2D1A8MPX8 630 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 MAGEB2O15479 319 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 EOMESO95936 686 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 RPA1P27694 616 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 CLCN3P51790 818 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 NLRP11P59045 1033 aaKnown RBP23.2■■□□□ 1.3
SMCO4-201ENST00000298966 TMEM119Q4V9L6 283 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 NT5DC1Q5TFE4 455 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 TRMT1LQ7Z2T5 733 aaKnown RBP23.2■■□□□ 1.3
SMCO4-201ENST00000298966 RDM1Q8NG50 284 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 ACSF2Q96CM8 615 aaPredicted RBP23.2■■□□□ 1.3
SMCO4-201ENST00000298966 PAGE5Q96GU1 130 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 PANK2Q9BZ23 570 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 GTPBP4Q9BZE4 634 aaKnown RBP23.2■■□□□ 1.3
SMCO4-201ENST00000298966 TUFT1Q9NNX1 390 aa23.2■■□□□ 1.3
SMCO4-201ENST00000298966 WDR87Q6ZQQ6 2873 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 ZNF292O60281 2723 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.19■■□□□ 1.3
SMCO4-201ENST00000298966 NT5C1B-RDH14C9J2C7 533 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 PLCG1P19174 1290 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 AOC1P19801 751 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 EIF4BP23588 611 aaKnown RBP23.19■■□□□ 1.3
SMCO4-201ENST00000298966 TMOD1P28289 359 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 CDC25AP30304 524 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 CCT6AP40227 531 aaKnown RBP23.19■■□□□ 1.3
SMCO4-201ENST00000298966 CWF19L1Q69YN2 538 aaKnown RBP23.19■■□□□ 1.3
SMCO4-201ENST00000298966 B3GNT9Q6UX72 402 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 HELQQ8TDG4 1101 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 SMARCE1Q969G3 411 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 GSDMAQ96QA5 445 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 KBTBD4Q9NVX7 518 aa23.19■■□□□ 1.3
SMCO4-201ENST00000298966 MAFBQ9Y5Q3 323 aaPredicted RBP23.19■■□□□ 1.3
SMCO4-201ENST00000298966 DENND4AQ7Z401 1863 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 DHX15O43143 795 aaKnown RBP23.18■■□□□ 1.3
SMCO4-201ENST00000298966 SFNP31947 248 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 BCAR1P56945 870 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 GIT2Q14161 759 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 EPHA7Q15375 998 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 NCAPH2Q6IBW4 605 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 VPS52Q8N1B4 723 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 SPATA20Q8TB22 786 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 NAT10Q9H0A0 1025 aaKnown RBP23.18■■□□□ 1.3
SMCO4-201ENST00000298966 ZBP1Q9H171 429 aa23.18■■□□□ 1.3
SMCO4-201ENST00000298966 A0A0U1RQF3 1178 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMCO4-201ENST00000298966 EPCAMP16422 314 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 JAK3P52333 1124 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 UVSSAQ2YD98 709 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 EFCAB12Q6NXP0 572 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 CCDC105Q8IYK2 499 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 CCDC47Q96A33 483 aaKnown RBP23.17■■□□□ 1.3
SMCO4-201ENST00000298966 SCLT1Q96NL6 688 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 PNMA5Q96PV4 448 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 RTP3Q9BQQ7 232 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 ADAMTS10Q9H324 1103 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 RMND1Q9NWS8 449 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 DMDP11532 3685 aa23.17■■□□□ 1.3
SMCO4-201ENST00000298966 CARNS1A5YM72 827 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 SPDYE4A6NLX3 237 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 PSAPP07602 524 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 POLGP54098 1239 aaPredicted RBP23.16■■□□□ 1.3
SMCO4-201ENST00000298966 NLRP12P59046 1061 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 PNOCQ13519 176 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 TDGQ13569 410 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 ANGPT1Q15389 498 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 CT47A1Q5JQC4 288 aaPredicted RBP23.16■■□□□ 1.3
SMCO4-201ENST00000298966 ZNF746Q6NUN9 644 aaPredicted RBP23.16■■□□□ 1.3
SMCO4-201ENST00000298966 TMC5Q6UXY8 1006 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 SV2BQ7L1I2 683 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 OTOP3Q7RTS5 596 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 ZNF598Q86UK7 904 aaKnown RBP23.16■■□□□ 1.3
SMCO4-201ENST00000298966 SLC22A17Q8WUG5 538 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 AUTS2Q8WXX7 1259 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 LARP4BQ92615 738 aaKnown RBP23.16■■□□□ 1.3
SMCO4-201ENST00000298966 FAM167AQ96KS9 214 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 DACH1Q9UI36 760 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms