RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 RASGEF1CQ8N431 466 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 EIF1ADQ8N9N8 165 aaKnown RBP13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 XXYLT1Q8NBI6 393 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 MYH1P12882 1939 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 MYH4Q9Y623 1939 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 GOLGA8MH3BSY2 632 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 NQO1P15559 274 aaKnown RBP13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 TNNI1P19237 187 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 ANXA13P27216 316 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 IL9RQ01113 521 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 DAB2IPQ5VWQ8 1189 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 SLC47A2Q86VL8 602 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 AGAP11Q8TF27 550 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 FAM84AQ96KN4 292 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 GGA2Q9UJY4 613 aa13.46□□□□□ -0.25
TMEM200A-201ENST00000296978 ANKRD63C9JTQ0 380 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 RTN2O75298 545 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 CA4P22748 312 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 ALDH5A1P51649 535 aaPredicted RBP13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 STAT2P52630 851 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 ITGA8P53708 1063 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 DCAF4Q8WV16 495 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.26
TMEM200A-201ENST00000296978 ATXN2Q99700 1313 aaKnown RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 DDTLA6NHG4 134 aaPredicted RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 A8MUI8 341 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 PDHA1P08559 390 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 RARGP13631 454 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 AUHQ13825 339 aaKnown RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 EPM2AIP1Q7L775 607 aaPredicted RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 C4orf33Q8N1A6 199 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 PGM2Q96G03 612 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 ACCSQ96QU6 501 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 SAYSD1Q9NPB0 183 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 UBR2Q8IWV8 1755 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 CFAP73A6NFT4 308 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 PI4K2BG5E9Z4 385 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 GH1P01241 217 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 TTC27Q6P3X3 843 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 ETNPPLQ8TBG4 499 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 MCM8Q9UJA3 840 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 ARL2BPQ9Y2Y0 163 aa13.45□□□□□ -0.26
TMEM200A-201ENST00000296978 TMEM150BA6NC51 233 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 SLITRK3O94933 977 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 POLD1P28340 1107 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 PRUNE1Q86TP1 453 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 EXOC3L1Q86VI1 746 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 KIFC3Q9BVG8 833 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ARHGEF10LQ9HCE6 1279 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 MYBL1P10243 752 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 CD58P19256 250 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 MMP13P45452 471 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 COPS2P61201 443 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 XRCC4Q13426 336 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 RASA3Q14644 834 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 CNGA2Q16280 664 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 HYIQ5T013 277 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 SLFN11Q7Z7L1 901 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ERP27Q96DN0 273 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ALG13Q9NP73 1137 aaKnown RBP13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 GPRC5CQ9NQ84 441 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ENO4A6NNW6 628 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 TBX3O15119 743 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ASAP2O43150 1006 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 SNX3O60493 162 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ARP10275 920 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ALAS1P13196 640 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 CLK2P49760 499 aaKnown RBP13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 STRN3Q13033 797 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 TMEM179Q6ZVK1 233 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 C11orf70Q9BRQ4 267 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 KCNQ5Q9NR82 932 aa13.44□□□□□ -0.26
TMEM200A-201ENST00000296978 HSPBP1Q9NZL4 362 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms