RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 IFI16Q16666 785 aaKnown RBP12.71□□□□□ -0.38
RHO-201ENST00000296271 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.38
RHO-201ENST00000296271 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 UBAP2Q5T6F2 1119 aaKnown RBP12.71□□□□□ -0.38
RHO-201ENST00000296271 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 ASAP3Q8TDY4 903 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 CAVIN3Q969G5 261 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 GPRASP2Q96D09 838 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.38
RHO-201ENST00000296271 TEX13BQ9BXU2 312 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 BTBD7Q9P203 1132 aa12.71□□□□□ -0.38
RHO-201ENST00000296271 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 ACTN2P35609 894 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 UAP1Q16222 522 aaPredicted RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 FAM71AQ8IYT1 594 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 IQCKQ8N0W5 287 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 RASGEF1CQ8N431 466 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 MTFR1LQ9H019 292 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 ST6GALNAC4Q9H4F1 302 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 INTUQ9ULD6 942 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 AFG3L2Q9Y4W6 797 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 MYH9P35579 1960 aaKnown RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 TNFRSF8P28908 595 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 PAK2Q13177 524 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 VGLL4Q14135 290 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 MYBPC2Q14324 1141 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 KRT39Q6A163 491 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 SH3GL2Q99962 352 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 PSD3Q9NYI0 1048 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
RHO-201ENST00000296271 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
RHO-201ENST00000296271 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
RHO-201ENST00000296271 KRT5P13647 590 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 CYP11B1P15538 503 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 COMTP21964 271 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 ISCUQ9H1K1 167 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 TAF1DQ9H5J8 278 aaPredicted RBP12.69□□□□□ -0.38
RHO-201ENST00000296271 RAB20Q9NX57 234 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 SPATA31C2B4DYI2 1134 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 HSF2BPO75031 334 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 PSAPP07602 524 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 CETN1Q12798 172 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 ALCAMQ13740 583 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 CFAP58Q5T655 872 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 LMBR1Q8WVP7 490 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 SHC3Q92529 594 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 C18orf8Q96DM3 657 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 CENPHQ9H3R5 247 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 ANKFY1Q9P2R3 1169 aa12.69□□□□□ -0.38
RHO-201ENST00000296271 UMODL1Q5DID0 1318 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 ARID2Q68CP9 1835 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 ANXA13P27216 316 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 POU5F1Q01860 360 aaKnown RBP12.68□□□□□ -0.38
RHO-201ENST00000296271 EMC2Q15006 297 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SYCE1Q8N0S2 351 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 FAM76AQ8TAV0 307 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
RHO-201ENST00000296271 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
RHO-201ENST00000296271 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 GRIN3BO60391 1043 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 PGK2P07205 417 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 PYGMP11217 842 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 MARK3P27448 753 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 HSD17B3P37058 310 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 POLGP54098 1239 aaPredicted RBP12.68□□□□□ -0.38
RHO-201ENST00000296271 NNTQ13423 1086 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.68□□□□□ -0.38
RHO-201ENST00000296271 CPA5Q8WXQ8 436 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 PCYT2Q99447 389 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 NUP85Q9BW27 656 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 TARS2Q9BW92 718 aaKnown RBP12.68□□□□□ -0.38
RHO-201ENST00000296271 TMEM8AQ9HCN3 771 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
RHO-201ENST00000296271 SYNGAP1Q96PV0 1343 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 O00370 1275 aa12.67□□□□□ -0.38
RHO-201ENST00000296271 CES2O00748 559 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms