RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CEP120Q8N960 986 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 DBF4BQ8NFT6 615 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 BPIFA3Q9BQP9 254 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 CDT1Q9H211 546 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
CCDC140-201ENST00000295226 ZMYND8Q9ULU4 1186 aaPredicted RBP16.55■□□□□ 0.24
CCDC140-201ENST00000295226 A0A0B4J269 797 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 CSF2RAP15509 400 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 MSNP26038 577 aaKnown RBP16.54■□□□□ 0.24
CCDC140-201ENST00000295226 ACOT2P49753 483 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 MYL5Q02045 173 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 CT47A1Q5JQC4 288 aaPredicted RBP16.54■□□□□ 0.24
CCDC140-201ENST00000295226 UBXN11Q5T124 520 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 TWF2Q6IBS0 349 aaKnown RBP16.54■□□□□ 0.24
CCDC140-201ENST00000295226 NOTUMQ6P988 496 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 MPZL3Q6UWV2 235 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 RTN4RL1Q86UN2 441 aaPredicted RBP16.54■□□□□ 0.24
CCDC140-201ENST00000295226 TMEM192Q8IY95 271 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 MSTO1Q9BUK6 570 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 DMAC2Q9NW81 257 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 AGO2Q9UKV8 859 aaKnown RBP16.54■□□□□ 0.24
CCDC140-201ENST00000295226 HES2Q9Y543 173 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 STYXL1Q9Y6J8 313 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 SQORQ9Y6N5 450 aa16.54■□□□□ 0.24
CCDC140-201ENST00000295226 BECN2A8MW95 431 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 N4BP3O15049 544 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 TNFSF9P41273 254 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 FKBP3Q00688 224 aaKnown RBP16.53■□□□□ 0.24
CCDC140-201ENST00000295226 MCL1Q07820 350 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 PLEKHG4Q58EX7 1191 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 IRF2BP1Q8IU81 584 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 GOLGA5Q8TBA6 731 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 ADAM2Q99965 735 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 FAM213AQ9BRX8 229 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 HSD3B7Q9H2F3 369 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 TANC1Q9C0D5 1861 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 EXOC3O60645 756 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 AKAP3O75969 853 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 ACRP10323 421 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 GARTP22102 1010 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 AXLP30530 894 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 DSC3Q14574 896 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC140-201ENST00000295226 PCBP1Q15365 356 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC140-201ENST00000295226 SLFN12LQ6IEE8 588 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 MFSD5Q6N075 450 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 CBWD2Q8IUF1 395 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 BADQ92934 168 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 PRKAG2Q9UGJ0 569 aa16.53■□□□□ 0.24
CCDC140-201ENST00000295226 CETN3O15182 167 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 CXCL10P02778 98 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 ZSCAN20P17040 1043 aaPredicted RBP16.52■□□□□ 0.23
CCDC140-201ENST00000295226 RPL13P26373 211 aaKnown RBP16.52■□□□□ 0.23
CCDC140-201ENST00000295226 SLC27A1Q6PCB7 646 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.23
CCDC140-201ENST00000295226 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.23
CCDC140-201ENST00000295226 XXYLT1Q8NBI6 393 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 LINC01599Q8WXQ3 324 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 APOL6Q9BWW8 343 aa16.52■□□□□ 0.23
CCDC140-201ENST00000295226 CGNQ9P2M7 1197 aaKnown RBP16.52■□□□□ 0.23
CCDC140-201ENST00000295226 SMTNL1A8MU46 457 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 IKBKBO14920 756 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 FAM189A1O60320 539 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 ADRB2P07550 413 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 SNRPFP62306 86 aaKnown RBP16.51■□□□□ 0.23
CCDC140-201ENST00000295226 SLC9A9Q8IVB4 645 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 SEPT8Q92599 483 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 ADPGKQ9BRR6 497 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
CCDC140-201ENST00000295226 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
CCDC140-201ENST00000295226 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 RNF19AQ9NV58 838 aa16.51■□□□□ 0.23
CCDC140-201ENST00000295226 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 OGTO15294 1046 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 TPM3P06753 285 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 MCF2P10911 925 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 ATP1A3P13637 1013 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 AKAP5P24588 427 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 WNT7BP56706 349 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 NFIL3Q16649 462 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 GPD1LQ8N335 351 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 SMG8Q8ND04 991 aaKnown RBP16.5■□□□□ 0.23
CCDC140-201ENST00000295226 CXCL16Q9H2A7 254 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 PCDHB2Q9Y5E7 798 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 ENPP3O14638 875 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
CCDC140-201ENST00000295226 EXTL3O43909 919 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
CCDC140-201ENST00000295226 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
CCDC140-201ENST00000295226 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms