RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NR1H3Q13133 447 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZNF449Q6P9G9 518 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 TOGARAM2Q6ZUX3 1019 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 OTOP1Q7RTM1 612 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ABHD10Q9NUJ1 306 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 RANBP17Q9H2T7 1088 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 MIF4GDA9UHW6 222 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 CREB3O43889 395 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ANTXR2P58335 489 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 SNAP25P60880 206 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 MUM1L1Q5H9M0 696 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 ATG16L1Q676U5 607 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 KCNB2Q92953 911 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 NRBF2Q96F24 287 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 NCAPGQ9BPX3 1015 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 TBK1Q9UHD2 729 aa12.65□□□□□ -0.38
SYNGAP1-201ENST00000293748 CPP00450 1065 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CCDC144BQ3MJ40 725 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 NME8Q8N427 588 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CCDC138Q96M89 665 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 YY1AP1Q9H869 796 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 SPAG7O75391 227 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CYP4A11Q02928 519 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 SNX1Q13596 522 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 ADAMTS1Q9UHI8 967 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 MCF2LO15068 1137 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 GFPT2O94808 682 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 KPNA2P52292 529 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 LRRC41Q15345 812 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 GDAP1Q8TB36 358 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 COG1Q8WTW3 980 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 HDAC11Q96DB2 347 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 GCNT4Q9P109 453 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 PCDHB6Q9Y5E3 794 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 DOCK1Q14185 1865 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CCND2P30279 289 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 PRKCZQ05513 592 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 DRP2Q13474 957 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 NAA30Q147X3 362 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 SRLQ86TD4 932 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 PDIK1LQ8N165 341 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 MSL3Q8N5Y2 521 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 AP1M1Q9BXS5 423 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 TRIM55Q9BYV6 548 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMEM60Q9H2L4 133 aa12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-201ENST00000293748 CA8P35219 290 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 PPP2R2AP63151 447 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TROAPQ12815 778 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMED1Q13445 227 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 CENPUQ71F23 418 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 RFX6Q8HWS3 928 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 CDHR1Q96JP9 859 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 MRFAP1Q9Y605 127 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 IQANK1A0A1B0GTG1 560 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 A6NJR5 290 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 FGGP02679 453 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 CYP2C19P33261 490 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 RWDD2BP57060 319 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 STXBP2Q15833 593 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 ARMC2Q8NEN0 867 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 JMJD4Q9H9V9 463 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 BAZ2AQ9UIF9 1905 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TARSL2A2RTX5 802 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 CAPN9O14815 690 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 GYG2O15488 501 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TTI1O43156 1089 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms