RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ANKRD20A3Q5VUR7 823 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
UBR1-201ENST00000290650 HHIPL2Q6UWX4 724 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 FRMD5Q7Z6J6 570 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 DNAAF3Q8N9W5 541 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 MCUQ8NE86 351 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 MTMR8Q96EF0 704 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 C9orf72Q96LT7 481 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 KLF6Q99612 283 aaPredicted RBP5.11□□□□□ -1.59
UBR1-201ENST00000290650 SNX25Q9H3E2 840 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 TAF1DQ9H5J8 278 aaPredicted RBP5.11□□□□□ -1.59
UBR1-201ENST00000290650 HOMER3Q9NSC5 361 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 MCF2LO15068 1137 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 TOM1L1O75674 476 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 STAMBPO95630 424 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 YY1P25490 414 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 MUM1L1Q5H9M0 696 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 RWDD4Q6NW29 188 aaKnown RBP5.11□□□□□ -1.59
UBR1-201ENST00000290650 CCDC62Q6P9F0 684 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 FOXR1Q6PIV2 292 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 RPS6KC1Q96S38 1066 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 EHD4Q9H223 541 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 LCMT1Q9UIC8 334 aa5.11□□□□□ -1.59
UBR1-201ENST00000290650 HERC5Q9UII4 1024 aaKnown RBP5.11□□□□□ -1.59
UBR1-201ENST00000290650 CRCPO75575 148 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZRANB2O95218 330 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBR1-201ENST00000290650 GGPS1O95749 300 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 COMTP21964 271 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 RPA1P27694 616 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 NEDD9Q14511 834 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 WDR72Q3MJ13 1102 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KLHDC7AQ5VTJ3 777 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CDKAL1Q5VV42 579 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CATSPER4Q7RTX7 472 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZNF571Q7Z3V5 609 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 SDCCAG8Q86SQ7 713 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 CCDC197Q8NCU1 140 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MMP19Q99542 508 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ANKZF1Q9H8Y5 726 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAM49BQ9NUQ9 324 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PNMA2Q9UL42 364 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ITIH6Q6UXX5 1313 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 A0A0G2JND7 137 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PRPSAP2O60256 369 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 STK10O94804 968 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 ITGA4P13612 1032 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 OSBPP22059 807 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CA4P22748 312 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ARHGAP25P42331 645 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 JAK3P52333 1124 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PSMC1P62191 440 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 SLC10A5Q5PT55 438 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KRT39Q6A163 491 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 GPD1LQ8N335 351 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZNF384Q8TF68 577 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PYROXD1Q8WU10 500 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MXRA8Q9BRK3 442 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MTA3Q9BTC8 594 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 BCAS3Q9H6U6 928 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SUDS3Q9H7L9 328 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 AGPAT3Q9NRZ7 376 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 UBE4BO95155 1302 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 RASA4BC9J798 803 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 RASA4O43374 803 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 NR3C2P08235 984 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CTSHP09668 335 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 IREB2P48200 963 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 GPC3P51654 580 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 DLG4P78352 724 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KCNT1Q5JUK3 1230 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CCNI2Q6ZMN8 369 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZBED8Q8IZ13 594 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SYT2Q8N9I0 419 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 FBXL13Q8NEE6 735 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 CASKIN2Q8WXE0 1202 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 EXT2Q93063 718 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ARL8AQ96BM9 186 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAF2Q96CS3 445 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ABCF3Q9NUQ8 709 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 MYO9BQ13459 2157 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 PDXKO00764 312 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 BNIP3LO60238 219 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAM153BP0C7A2 387 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TFDP1Q14186 410 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 EPHA7Q15375 998 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAM153CQ494X1 144 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAM102AQ5T9C2 384 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 HIBCHQ6NVY1 386 aaPredicted RBP5.1□□□□□ -1.59
UBR1-201ENST00000290650 SRLQ86TD4 932 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 SCYL3Q8IZE3 742 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ZNF280CQ8ND82 737 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 WHAMMQ8TF30 809 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 CPB2Q96IY4 423 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 ACAD9Q9H845 621 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 TBC1D22BQ9NU19 505 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 KLK14Q9P0G3 267 aa5.1□□□□□ -1.59
UBR1-201ENST00000290650 FAM153AQ9UHL3 310 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms